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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180833965
ODKD01001361
81880
Gammaproteobacteria
GAG
Leu
>WENV180834344
ODKD01014806
30640
Gammaproteobacteria
GGA
Ser
>WENV180834243
ODKD01007412
238438
Gammaproteobacteria
>WENV180834244
ODKD01007412
238438
Gammaproteobacteria
>WENV180834297
ODKD01009982
103428
Gammaproteobacteria
TAG
Leu
>WENV180834443
ODKD01027045
3276
Gammaproteobacteria
>WENV180834208
ODKD01006528
108171
Gammaproteobacteria
GTA
Tyr
>WENV180834298
ODKD01010072
145168
Gammaproteobacteria
CAT
Met
>WENV180834667
ODKD01092569
150561
Gammaproteobacteria
ACG
Arg
>WENV180834250
ODKD01007698
397091
Gammaproteobacteria
TTG
Gln
>WENV180834251
ODKD01007698
397091
Gammaproteobacteria
TTG
Gln
>WENV180834286
ODKD01009393
397091
Gammaproteobacteria
TTG
Gln
>WENV180834660
ODKD01087160
339913
Gammaproteobacteria
TTT
Lys
>WENV180834333
ODKD01013777
358575
Gammaproteobacteria
TCC
Gly
>WENV180834368
ODKD01015694
58828
Gammaproteobacteria
TAA
Leu
>WENV180834112
ODKD01003061
3278
Gammaproteobacteria
>WENV180834620
ODKD01069710
147498
Gammaproteobacteria
GAC
Val
>WENV180834207
ODKD01006447
268376
Gammaproteobacteria
CTT
Lys
>WENV180834647
ODKD01081035
268376
Gammaproteobacteria
CTT
Lys
>WENV180834229
ODKD01007006
90409
Gammaproteobacteria
CAA
Leu
>WENV180834411
ODKD01021619
147499
Gammaproteobacteria
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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