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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180878086
ODLV01012381
243647
Bacillota
TTT
Lys
>WENV180877415
ODLV01000056
178679
Bacillota
CAT
Met
>WENV180877955
ODLV01006902
16842
Bacillota
CGA
Ser
>WENV180877855
ODLV01003747
409574
Bacillota
TGT
Thr
>WENV180877913
ODLV01005610
37213
Bacillota
TGA
Ser
>WENV180878441
ODLV01072121
338152
Bacillota
TTC
Glu
>WENV180878260
ODLV01030270
389888
Bacillota
GCC
Gly
>WENV180878503
ODLV01107989
235137
Bacillota
TGC
Ala
>WENV180877513
ODLV01000181
308424
Bacillota
TTT
Lys
>WENV180878258
ODLV01030270
308424
Bacillota
TTT
Lys
>WENV180878489
ODLV01099353
391536
Bacillota
TTC
Glu
>WENV180878247
ODLV01029113
44626
Bacillota
TAA
Leu
>WENV180878004
ODLV01009022
16834
Bacillota
GCT
Ser
>WENV180877853
ODLV01003747
444721
Bacillota
TCC
Gly
>WENV180877666
ODLV01000989
114002
Bacillota
CAA
Leu
>WENV180878378
ODLV01050639
37437
Bacillota
TAA
Leu
>WENV180878262
ODLV01030270
162028
Bacillota
ACG
Arg
>WENV180877421
ODLV01000056
113951
Bacillota
GTA
Tyr
>WENV180877511
ODLV01000181
113951
Bacillota
GTA
Tyr
>WENV180878490
ODLV01099353
243612
Bacillota
TAC
Val
>WENV180878202
ODLV01024099
155089
Bacillota
CAT
Met
>WENV180878448
ODLV01076085
147135
Bacillota
ACG
Arg
>WENV180877419
ODLV01000056
242848
Bacillota
GAA
Phe
>WENV180877585
ODLV01000396
242848
Bacillota
GAA
Phe
>WENV180878134
ODLV01016695
194150
Bacillota
TGG
Pro
>WENV180877818
ODLV01002829
185292
Bacillota
ACG
Arg
>WENV180877945
ODLV01006648
235197
Bacillota
GTC
Asp
>WENV180878336
ODLV01040923
235197
Bacillota
GTC
Asp
>WENV180877872
ODLV01004070
235197
Bacillota
GTC
Asp
>WENV180877884
ODLV01004504
235197
Bacillota
GTC
Asp
>WENV180878314
ODLV01036959
298620
Bacillota
CAT
Met
>WENV180877854
ODLV01003747
235288
Bacillota
TAC
Val
>WENV180878167
ODLV01019172
163753
Bacillota
TGG
Pro
>WENV180878084
ODLV01012381
243613
Bacillota
GTG
His
>WENV180877864
ODLV01003825
144672
Bacillota
TCT
Arg
>WENV180878288
ODLV01032892
152491
Bacillota
CAT
Met
>WENV180878496
ODLV01104378
199895
Bacillota
GTC
Asp
>WENV180878199
ODLV01023576
144762
Bacillota
TCT
Arg
>WENV180878287
ODLV01032892
281472
Bacillota
GGT
Thr
>WENV180878136
ODLV01016695
178024
Bacillota
TCT
Arg
>WENV180878379
ODLV01050813
315448
Bacillota
GGT
Thr
>WENV180878092
ODLV01012819
413657
Bacillota
CCC
Gly
>WENV180877740
ODLV01001839
272488
Bacillota
GAA
Phe
>WENV180878003
ODLV01009004
287034
Bacillota
GTT
Asn
>WENV180878085
ODLV01012381
343027
Bacillota
TTG
Gln
>WENV180877435
ODLV01000091
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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