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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181086324
OEAY01000397
243647
Bacillota
TTT
Lys
>WENV181086874
OEAY01004835
243647
Bacillota
TTT
Lys
>WENV181087452
OEAY01045997
243647
Bacillota
TTT
Lys
>WENV181087718
OEAY01136356
243647
Bacillota
TTT
Lys
>WENV181087499
OEAY01055549
178679
Bacillota
CAT
Met
>WENV181086462
OEAY01000786
16842
Bacillota
CGA
Ser
>WENV181087619
OEAY01085838
16842
Bacillota
CGA
Ser
>WENV181086780
OEAY01003125
390153
Bacillota
GCC
Gly
>WENV181087128
OEAY01012929
390153
Bacillota
GCC
Gly
>WENV181087308
OEAY01027740
37213
Bacillota
TGA
Ser
>WENV181087691
OEAY01126817
342730
Bacillota
CTC
Glu
>WENV181086460
OEAY01000783
267649
Bacillota
TAC
Val
>WENV181086734
OEAY01002550
267649
Bacillota
TAC
Val
>WENV181087525
OEAY01058759
338152
Bacillota
TTC
Glu
>WENV181087212
OEAY01017844
250201
Bacillota
TGC
Ala
>WENV181087284
OEAY01025202
37549
Bacillota
TAA
Leu
>WENV181087486
OEAY01051431
359540
Bacillota
GTT
Asn
>WENV181087736
OEAY01143835
359540
Bacillota
GTT
Asn
>WENV181087531
OEAY01059214
148348
Bacillota
GTC
Asp
>WENV181087462
OEAY01047006
243099
Bacillota
GTT
Asn
>WENV181087407
OEAY01037317
389888
Bacillota
GCC
Gly
>WENV181087191
OEAY01016773
307003
Bacillota
TGC
Ala
>WENV181087225
OEAY01018856
243119
Bacillota
CTT
Lys
>WENV181087490
OEAY01052060
235150
Bacillota
TGC
Ala
>WENV181087213
OEAY01017985
152047
Bacillota
GGG
Pro
>WENV181087730
OEAY01143364
235137
Bacillota
TGC
Ala
>WENV181087405
OEAY01037317
308424
Bacillota
TTT
Lys
>WENV181086308
OEAY01000368
391536
Bacillota
TTC
Glu
>WENV181086325
OEAY01000397
391536
Bacillota
TTC
Glu
>WENV181086875
OEAY01004835
391536
Bacillota
TTC
Glu
>WENV181087122
OEAY01012787
391536
Bacillota
TTC
Glu
>WENV181087713
OEAY01135063
391536
Bacillota
TTC
Glu
>WENV181087307
OEAY01027493
241761
Bacillota
TAC
Val
>WENV181087157
OEAY01015031
198770
Bacillota
GTC
Asp
>WENV181086833
OEAY01003962
16834
Bacillota
GCT
Ser
>WENV181087020
OEAY01008670
16834
Bacillota
GCT
Ser
>WENV181086306
OEAY01000360
114002
Bacillota
CAA
Leu
>WENV181086881
OEAY01004954
114002
Bacillota
CAA
Leu
>WENV181086664
OEAY01001852
392638
Bacillota
TGT
Thr
>WENV181087304
OEAY01027493
342736
Bacillota
TTG
Gln
>WENV181086724
OEAY01002431
37437
Bacillota
TAA
Leu
>WENV181087256
OEAY01021778
37437
Bacillota
TAA
Leu
>WENV181086873
OEAY01004835
296878
Bacillota
GTT
Asn
>WENV181087409
OEAY01037317
162028
Bacillota
ACG
Arg
>WENV181087067
OEAY01009928
113951
Bacillota
GTA
Tyr
>WENV181086309
OEAY01000368
243612
Bacillota
TAC
Val
>WENV181086326
OEAY01000397
243612
Bacillota
TAC
Val
>WENV181086876
OEAY01004835
243612
Bacillota
TAC
Val
>WENV181087123
OEAY01012787
243612
Bacillota
TAC
Val
>WENV181087714
OEAY01135063
243612
Bacillota
TAC
Val
>WENV181087354
OEAY01031936
144766
Bacillota
CAT
Met
>WENV181087709
OEAY01134586
144766
Bacillota
CAT
Met
>WENV181086341
OEAY01000427
155089
Bacillota
CAT
Met
>WENV181087476
OEAY01049296
37551
Bacillota
CGA
Ser
>WENV181087532
OEAY01059214
286137
Bacillota
GAA
Phe
>WENV181086932
OEAY01006112
338676
Bacillota
CCG
Arg
>WENV181087665
OEAY01112519
81373
Bacillota
GTA
Tyr
>WENV181087295
OEAY01026501
147135
Bacillota
ACG
Arg
>WENV181087682
OEAY01122163
144599
Bacillota
GTC
Asp
>WENV181087661
OEAY01108357
148268
Bacillota
CGG
Pro
>WENV181087065
OEAY01009928
242848
Bacillota
GAA
Phe
>WENV181087341
OEAY01030823
242848
Bacillota
GAA
Phe
>WENV181086263
OEAY01000251
342895
Bacillota
CAT
Met
>WENV181086470
OEAY01000812
342895
Bacillota
CAT
Met
>WENV181086884
OEAY01005051
342895
Bacillota
CAT
Met
>WENV181086345
OEAY01000437
194150
Bacillota
TGG
Pro
>WENV181087414
OEAY01038947
96694
Bacillota
TAG
Leu
>WENV181087535
OEAY01059584
152045
Bacillota
CAT
Met
>WENV181087549
OEAY01062020
235701
Bacillota
TTT
Lys
>WENV181085960
OEAY01000019
154711
Bacillota
TGG
Pro
>WENV181087206
OEAY01017330
152046
Bacillota
TCT
Arg
>WENV181086596
OEAY01001375
237846
Bacillota
GCC
Gly
>WENV181086177
OEAY01000169
235197
Bacillota
GTC
Asp
>WENV181086463
OEAY01000787
235197
Bacillota
GTC
Asp
>WENV181087138
OEAY01013712
235197
Bacillota
GTC
Asp
>WENV181087145
OEAY01014258
235197
Bacillota
GTC
Asp
>WENV181086179
OEAY01000169
368876
Bacillota
GCC
Gly
>WENV181086322
OEAY01000397
368876
Bacillota
GCC
Gly
>WENV181086872
OEAY01004835
368876
Bacillota
GCC
Gly
>WENV181086877
OEAY01004835
368876
Bacillota
GCC
Gly
>WENV181087562
OEAY01064445
152051
Bacillota
ACG
Arg
>WENV181087488
OEAY01051431
388132
Bacillota
TTC
Glu
>WENV181087600
OEAY01081080
388132
Bacillota
TTC
Glu
>WENV181087655
OEAY01105433
388132
Bacillota
TTC
Glu
>WENV181087489
OEAY01051431
235288
Bacillota
TAC
Val
>WENV181087601
OEAY01081080
235288
Bacillota
TAC
Val
>WENV181086662
OEAY01001852
235288
Bacillota
TAC
Val
>WENV181087579
OEAY01069838
163753
Bacillota
TGG
Pro
>WENV181087465
OEAY01047006
241526
Bacillota
CTT
Lys
>WENV181086666
OEAY01001852
118077
Bacillota
>WENV181086661
OEAY01001852
436750
Bacillota
TCC
Gly
>WENV181086240
OEAY01000215
157838
Bacillota
GTC
Asp
>WENV181087711
OEAY01134657
157838
Bacillota
GTC
Asp
>WENV181087450
OEAY01045997
243613
Bacillota
GTG
His
>WENV181086665
OEAY01001852
108675
Bacillota
GTA
Tyr
>WENV181087530
OEAY01059214
347851
Bacillota
TTC
Glu
>WENV181086885
OEAY01005054
144672
Bacillota
TCT
Arg
>WENV181087356
OEAY01031936
235292
Bacillota
CCA
Trp
>WENV181087236
OEAY01019566
152491
Bacillota
CAT
Met
>WENV181086663
OEAY01001852
199895
Bacillota
GTC
Asp
>WENV181087720
OEAY01136704
199895
Bacillota
GTC
Asp
>WENV181087681
OEAY01121588
144762
Bacillota
TCT
Arg
>WENV181087445
OEAY01045336
241638
Bacillota
GTG
His
>WENV181087705
OEAY01133803
194064
Bacillota
GAT
Ile
>WENV181087235
OEAY01019566
281472
Bacillota
GGT
Thr
>WENV181087534
OEAY01059584
281472
Bacillota
GGT
Thr
>WENV181086347
OEAY01000437
178024
Bacillota
TCT
Arg
>WENV181086552
OEAY01001230
315448
Bacillota
GGT
Thr
>WENV181086294
OEAY01000322
413657
Bacillota
CCC
Gly
>WENV181086813
OEAY01003568
272488
Bacillota
GAA
Phe
>WENV181087306
OEAY01027493
393635
Bacillota
TTC
Glu
>WENV181086323
OEAY01000397
287034
Bacillota
GTT
Asn
>WENV181086456
OEAY01000748
287034
Bacillota
GTT
Asn
>WENV181087451
OEAY01045997
343027
Bacillota
TTG
Gln
>WENV181086643
OEAY01001736
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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