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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181122206
OEFL01136077
412480
Bacteroidota
>WENV181121388
OEFL01003224
147942
Bacteroidota
GTC
Asp
>WENV181121389
OEFL01003224
147942
Bacteroidota
GTC
Asp
>WENV181122187
OEFL01120239
97610
Bacteroidota
GTA
Tyr
>WENV181121500
OEFL01005502
47461
Bacteroidota
TGA
Ser
>WENV181121587
OEFL01009384
47461
Bacteroidota
TGA
Ser
>WENV181121397
OEFL01003347
246808
Bacteroidota
CTT
Lys
>WENV181122268
OEFL01176092
246808
Bacteroidota
CTT
Lys
>WENV181121348
OEFL01002630
119907
Bacteroidota
CAA
Leu
>WENV181121408
OEFL01003463
119907
Bacteroidota
CAA
Leu
>WENV181121504
OEFL01005567
119907
Bacteroidota
CAA
Leu
>WENV181121116
OEFL01000508
99288
Bacteroidota
TAG
Leu
>WENV181121166
OEFL01000878
99288
Bacteroidota
TAG
Leu
>WENV181122180
OEFL01117754
345063
Bacteroidota
GGT
Thr
>WENV181122047
OEFL01055547
338486
Bacteroidota
CAT
Met
>WENV181121518
OEFL01006165
258903
Bacteroidota
>WENV181121580
OEFL01008854
344824
Bacteroidota
CCG
Arg
>WENV181122014
OEFL01048709
340029
Bacteroidota
TTC
Glu
>WENV181121986
OEFL01041674
413663
Bacteroidota
CTG
Gln
>WENV181121751
OEFL01017208
136244
Bacteroidota
TAC
Val
>WENV181121574
OEFL01008642
128178
Bacteroidota
TAC
Val
>WENV181122270
OEFL01176304
128178
Bacteroidota
TAC
Val
>WENV181122272
OEFL01176498
128178
Bacteroidota
TAC
Val
>WENV181120992
OEFL01000053
413952
Bacteroidota
>WENV181121151
OEFL01000765
413952
Bacteroidota
>WENV181122237
OEFL01164360
412479
Bacteroidota
TTG
Gln
>WENV181121450
OEFL01004279
246224
Bacteroidota
GGG
Pro
>WENV181121861
OEFL01024163
237247
Bacteroidota
TTT
Lys
>WENV181121927
OEFL01032350
147147
Bacteroidota
GTG
His
>WENV181121186
OEFL01001171
17035
Bacteroidota
GGA
Ser
>WENV181121290
OEFL01002053
145504
Bacteroidota
TGT
Thr
>WENV181121673
OEFL01012913
145504
Bacteroidota
TGT
Thr
>WENV181122186
OEFL01120239
145504
Bacteroidota
TGT
Thr
>WENV181121668
OEFL01012637
176247
Bacteroidota
TCT
Arg
>WENV181121615
OEFL01010620
412439
Bacteroidota
CCA
Trp
>WENV181122177
OEFL01115258
127253
Bacteroidota
GGG
Pro
>WENV181121573
OEFL01008617
238671
Bacteroidota
TTT
Lys
>WENV181121160
OEFL01000807
191087
Bacteroidota
TCT
Arg
>WENV181121917
OEFL01031428
191087
Bacteroidota
TCT
Arg
>WENV181121642
OEFL01011706
155147
Bacteroidota
GGC
Ala
>WENV181121898
OEFL01028636
147939
Bacteroidota
CAT
Met
>WENV181121370
OEFL01002980
37794
Bacteroidota
TAA
Leu
>WENV181121539
OEFL01007179
37794
Bacteroidota
TAA
Leu
>WENV181121199
OEFL01001331
60822
Bacteroidota
GAG
Leu
>WENV181121241
OEFL01001651
60822
Bacteroidota
GAG
Leu
>WENV181122246
OEFL01167963
60822
Bacteroidota
GAG
Leu
>WENV181121029
OEFL01000129
414526
Bacteroidota
GCA
Cys
>WENV181121179
OEFL01001020
414526
Bacteroidota
GCA
Cys
>WENV181121547
OEFL01007554
414526
Bacteroidota
GCA
Cys
>WENV181121838
OEFL01022592
136207
Bacteroidota
TAC
Val
>WENV181121343
OEFL01002590
130479
Bacteroidota
TAC
Val
>WENV181120985
OEFL01000048
81773
Bacteroidota
CAG
Leu
>WENV181121016
OEFL01000092
16898
Bacteroidota
GGA
Ser
>WENV181121266
OEFL01001975
16898
Bacteroidota
GGA
Ser
>WENV181121369
OEFL01002980
296886
Bacteroidota
>WENV181121538
OEFL01007179
296886
Bacteroidota
>WENV181121361
OEFL01002864
148247
Bacteroidota
TGC
Ala
>WENV181121209
OEFL01001382
290994
Bacteroidota
CAT
Met
>WENV181121641
OEFL01011706
235802
Bacteroidota
CAT
Met
>WENV181122238
OEFL01165928
59182
Bacteroidota
GAG
Leu
>WENV181120998
OEFL01000059
144639
Bacteroidota
GGC
Ala
>WENV181121017
OEFL01000093
144639
Bacteroidota
GGC
Ala
>WENV181121057
OEFL01000296
151121
Bacteroidota
CAT
Met
>WENV181121133
OEFL01000644
47173
Bacteroidota
TGA
Ser
>WENV181121635
OEFL01011591
128241
Bacteroidota
TAC
Val
>WENV181120954
OEFL01000025
240012
Bacteroidota
CCC
Gly
>WENV181121172
OEFL01000928
240012
Bacteroidota
CCC
Gly
>WENV181121934
OEFL01033382
369111
Bacteroidota
TTC
Glu
>WENV181122242
OEFL01167300
369111
Bacteroidota
TTC
Glu
>WENV181122285
OEFL01177132
369111
Bacteroidota
TTC
Glu
>WENV181121242
OEFL01001651
95954
Bacteroidota
TAG
Leu
>WENV181120905
OEFL01000002
244299
Bacteroidota
CGG
Pro
>WENV181121002
OEFL01000064
127951
Bacteroidota
TAC
Val
>WENV181122278
OEFL01176650
127951
Bacteroidota
TAC
Val
>WENV181120993
OEFL01000053
244296
Bacteroidota
TTT
Lys
>WENV181121028
OEFL01000129
246641
Bacteroidota
GAA
Phe
>WENV181121203
OEFL01001359
246641
Bacteroidota
GAA
Phe
>WENV181121341
OEFL01002516
246641
Bacteroidota
GAA
Phe
>WENV181122039
OEFL01054245
196394
Bacteroidota
GTC
Asp
>WENV181121169
OEFL01000916
147945
Bacteroidota
CAT
Met
>WENV181121517
OEFL01006165
147945
Bacteroidota
CAT
Met
>WENV181121560
OEFL01008039
147945
Bacteroidota
CAT
Met
>WENV181121993
OEFL01042505
19317
Bacteroidota
GGA
Ser
>WENV181121027
OEFL01000123
159335
Bacteroidota
GTT
Asn
>WENV181121354
OEFL01002766
159335
Bacteroidota
GTT
Asn
>WENV181121386
OEFL01003169
159335
Bacteroidota
GTT
Asn
>WENV181121476
OEFL01004860
159335
Bacteroidota
GTT
Asn
>WENV181121721
OEFL01016304
159335
Bacteroidota
GTT
Asn
>WENV181121614
OEFL01010574
185921
Bacteroidota
GTC
Asp
>WENV181121985
OEFL01041592
146762
Bacteroidota
TGG
Pro
>WENV181121158
OEFL01000807
59413
Bacteroidota
GCT
Ser
>WENV181122228
OEFL01156398
412236
Bacteroidota
CCC
Gly
>WENV181121239
OEFL01001651
300376
Bacteroidota
TTT
Lys
>WENV181121398
OEFL01003347
300376
Bacteroidota
TTT
Lys
>WENV181121621
OEFL01010893
300376
Bacteroidota
TTT
Lys
>WENV181122245
OEFL01167963
300376
Bacteroidota
TTT
Lys
>WENV181121344
OEFL01002590
133943
Bacteroidota
TAC
Val
>WENV181121667
OEFL01012637
128249
Bacteroidota
TGG
Pro
>WENV181121419
OEFL01003728
96124
Bacteroidota
TAG
Leu
>WENV181121052
OEFL01000261
414472
Bacteroidota
TTG
Gln
>WENV181121206
OEFL01001365
414472
Bacteroidota
TTG
Gln
>WENV181121566
OEFL01008322
414472
Bacteroidota
TTG
Gln
>WENV181121365
OEFL01002951
154850
Bacteroidota
CAT
Met
>WENV181121921
OEFL01031687
154850
Bacteroidota
CAT
Met
>WENV181122087
OEFL01070998
154850
Bacteroidota
CAT
Met
>WENV181120917
OEFL01000009
302002
Bacteroidota
CGT
Thr
>WENV181121014
OEFL01000088
235129
Bacteroidota
GCC
Gly
>WENV181121192
OEFL01001252
235129
Bacteroidota
GCC
Gly
>WENV181121589
OEFL01009448
345164
Bacteroidota
CCT
Arg
>WENV181121180
OEFL01001038
345164
Bacteroidota
CCT
Arg
>WENV181121417
OEFL01003650
345164
Bacteroidota
CCT
Arg
>WENV181121066
OEFL01000333
155341
Bacteroidota
GTG
His
>WENV181121201
OEFL01001347
155341
Bacteroidota
GTG
His
>WENV181121372
OEFL01003029
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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