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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181143718
OEHM01006675
95987
Bacteroidota
CAA
Leu
>WENV181143853
OEHM01015363
339412
Bacteroidota
GGT
Thr
>WENV181143080
OEHM01000091
147942
Bacteroidota
GTC
Asp
>WENV181142956
OEHM01000019
306609
Bacteroidota
GAA
Phe
>WENV181143316
OEHM01000415
313065
Bacteroidota
>WENV181142952
OEHM01000019
97610
Bacteroidota
GTA
Tyr
>WENV181143443
OEHM01000856
47461
Bacteroidota
TGA
Ser
>WENV181143000
OEHM01000039
246808
Bacteroidota
CTT
Lys
>WENV181143897
OEHM01021237
246808
Bacteroidota
CTT
Lys
>WENV181143114
OEHM01000124
119907
Bacteroidota
CAA
Leu
>WENV181143517
OEHM01001668
119907
Bacteroidota
CAA
Leu
>WENV181142954
OEHM01000019
345063
Bacteroidota
GGT
Thr
>WENV181144069
OEHM01071934
394247
Bacteroidota
CTC
Glu
>WENV181142978
OEHM01000026
344824
Bacteroidota
CCG
Arg
>WENV181143046
OEHM01000070
340029
Bacteroidota
TTC
Glu
>WENV181143047
OEHM01000070
340029
Bacteroidota
TTC
Glu
>WENV181143705
OEHM01005412
136244
Bacteroidota
TAC
Val
>WENV181143499
OEHM01001395
128178
Bacteroidota
TAC
Val
>WENV181144160
OEHM01132997
128178
Bacteroidota
TAC
Val
>WENV181143303
OEHM01000390
246224
Bacteroidota
GGG
Pro
>WENV181143029
OEHM01000056
268513
Bacteroidota
TCC
Gly
>WENV181143052
OEHM01000073
17035
Bacteroidota
GGA
Ser
>WENV181142951
OEHM01000019
145504
Bacteroidota
TGT
Thr
>WENV181143126
OEHM01000133
145504
Bacteroidota
TGT
Thr
>WENV181143233
OEHM01000266
145504
Bacteroidota
TGT
Thr
>WENV181143109
OEHM01000118
320713
Bacteroidota
TTT
Lys
>WENV181143110
OEHM01000118
320713
Bacteroidota
TTT
Lys
>WENV181143111
OEHM01000118
320713
Bacteroidota
TTT
Lys
>WENV181143265
OEHM01000330
320713
Bacteroidota
TTT
Lys
>WENV181143266
OEHM01000330
320713
Bacteroidota
TTT
Lys
>WENV181143267
OEHM01000330
320713
Bacteroidota
TTT
Lys
>WENV181143050
OEHM01000071
176247
Bacteroidota
TCT
Arg
>WENV181143011
OEHM01000046
412439
Bacteroidota
CCA
Trp
>WENV181144074
OEHM01074315
238810
Bacteroidota
CGG
Pro
>WENV181143827
OEHM01012554
193809
Bacteroidota
CAT
Met
>WENV181144150
OEHM01131157
127253
Bacteroidota
GGG
Pro
>WENV181143257
OEHM01000319
238671
Bacteroidota
TTT
Lys
>WENV181143259
OEHM01000319
238671
Bacteroidota
TTT
Lys
>WENV181144104
OEHM01090789
37076
Bacteroidota
TAA
Leu
>WENV181143117
OEHM01000124
191087
Bacteroidota
TCT
Arg
>WENV181143158
OEHM01000162
191087
Bacteroidota
TCT
Arg
>WENV181143021
OEHM01000052
155147
Bacteroidota
GGC
Ala
>WENV181143003
OEHM01000042
147939
Bacteroidota
CAT
Met
>WENV181143293
OEHM01000372
37794
Bacteroidota
TAA
Leu
>WENV181143317
OEHM01000415
37794
Bacteroidota
TAA
Leu
>WENV181143112
OEHM01000118
60822
Bacteroidota
GAG
Leu
>WENV181143268
OEHM01000330
60822
Bacteroidota
GAG
Leu
>WENV181142950
OEHM01000019
414526
Bacteroidota
GCA
Cys
>WENV181143058
OEHM01000078
130479
Bacteroidota
TAC
Val
>WENV181144075
OEHM01074542
81773
Bacteroidota
CAG
Leu
>WENV181143322
OEHM01000428
148247
Bacteroidota
TGC
Ala
>WENV181143171
OEHM01000183
290994
Bacteroidota
CAT
Met
>WENV181143023
OEHM01000052
235802
Bacteroidota
CAT
Met
>WENV181144040
OEHM01053132
59182
Bacteroidota
GAG
Leu
>WENV181143922
OEHM01022980
144639
Bacteroidota
GGC
Ala
>WENV181143926
OEHM01023661
151121
Bacteroidota
CAT
Met
>WENV181143160
OEHM01000164
47173
Bacteroidota
TGA
Ser
>WENV181143302
OEHM01000390
128241
Bacteroidota
TAC
Val
>WENV181143861
OEHM01017112
240012
Bacteroidota
CCC
Gly
>WENV181143193
OEHM01000217
251411
Bacteroidota
GAA
Phe
>WENV181143706
OEHM01005464
369111
Bacteroidota
TTC
Glu
>WENV181143771
OEHM01009015
369111
Bacteroidota
TTC
Glu
>WENV181144182
OEHM01137348
369111
Bacteroidota
TTC
Glu
>WENV181143269
OEHM01000330
95954
Bacteroidota
TAG
Leu
>WENV181144016
OEHM01045374
354570
Bacteroidota
TTC
Glu
>WENV181143867
OEHM01018281
127951
Bacteroidota
TAC
Val
>WENV181144119
OEHM01103559
196394
Bacteroidota
GTC
Asp
>WENV181143164
OEHM01000167
21340
Bacteroidota
GGA
Ser
>WENV181142987
OEHM01000032
147945
Bacteroidota
CAT
Met
>WENV181143057
OEHM01000078
147945
Bacteroidota
CAT
Met
>WENV181143125
OEHM01000132
147945
Bacteroidota
CAT
Met
>WENV181143102
OEHM01000112
159335
Bacteroidota
GTT
Asn
>WENV181143202
OEHM01000243
159335
Bacteroidota
GTT
Asn
>WENV181143747
OEHM01008068
159335
Bacteroidota
GTT
Asn
>WENV181143292
OEHM01000372
239856
Bacteroidota
GCC
Gly
>WENV181142986
OEHM01000031
185921
Bacteroidota
GTC
Asp
>WENV181143115
OEHM01000124
59413
Bacteroidota
GCT
Ser
>WENV181143156
OEHM01000162
59413
Bacteroidota
GCT
Ser
>WENV181144035
OEHM01051308
146764
Bacteroidota
GTC
Asp
>WENV181143059
OEHM01000078
133943
Bacteroidota
TAC
Val
>WENV181143049
OEHM01000071
128249
Bacteroidota
TGG
Pro
>WENV181143134
OEHM01000145
96124
Bacteroidota
TAG
Leu
>WENV181143020
OEHM01000051
414472
Bacteroidota
TTG
Gln
>WENV181143019
OEHM01000051
154850
Bacteroidota
CAT
Met
>WENV181144091
OEHM01084980
302002
Bacteroidota
CGT
Thr
>WENV181143100
OEHM01000109
110457
Bacteroidota
TAG
Leu
>WENV181143027
OEHM01000056
147941
Bacteroidota
TGT
Thr
>WENV181144037
OEHM01052968
235129
Bacteroidota
GCC
Gly
>WENV181143103
OEHM01000113
345164
Bacteroidota
CCT
Arg
>WENV181143018
OEHM01000051
155341
Bacteroidota
GTG
His
>WENV181143461
OEHM01001028
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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