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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181244598
OFFI01000319
237957
Bacillota
GTT
Asn
>WENV181244854
OFFI01001871
240192
Bacillota
CTG
Gln
>WENV181244574
OFFI01000267
235154
Bacillota
GTT
Asn
>WENV181244830
OFFI01001557
429443
Bacillota
GCA
Cys
>WENV181245282
OFFI01061804
281701
Bacillota
TGC
Ala
>WENV181244601
OFFI01000319
237265
Bacillota
TAC
Val
>WENV181244824
OFFI01001521
302152
Bacillota
CTT
Lys
>WENV181244825
OFFI01001521
302152
Bacillota
CTT
Lys
>WENV181244540
OFFI01000198
16359
Bacillota
CGA
Ser
>WENV181245097
OFFI01013491
247786
Bacillota
CGT
Thr
>WENV181244688
OFFI01000624
41154
Bacillota
TAA
Leu
>WENV181244480
OFFI01000103
156937
Bacillota
GTG
His
>WENV181244971
OFFI01005457
247747
Bacillota
GGT
Thr
>WENV181245285
OFFI01062029
173314
Bacillota
GAT
Ile
>WENV181244793
OFFI01001210
37269
Bacillota
TGA
Ser
>WENV181245263
OFFI01051749
340131
Bacillota
GTT
Asn
>WENV181244616
OFFI01000325
169968
Bacillota
CAT
Met
>WENV181244984
OFFI01006042
413152
Bacillota
TCC
Gly
>WENV181244600
OFFI01000319
390525
Bacillota
TTC
Glu
>WENV181244607
OFFI01000319
390525
Bacillota
TTC
Glu
>WENV181244514
OFFI01000145
162445
Bacillota
CAT
Met
>WENV181245236
OFFI01040564
201704
Bacillota
GAT
Ile
>WENV181244687
OFFI01000624
100326
Bacillota
GTA
Tyr
>WENV181245222
OFFI01037130
100326
Bacillota
GTA
Tyr
>WENV181245046
OFFI01009492
301373
Bacillota
CTC
Glu
>WENV181244554
OFFI01000217
147684
Bacillota
ACG
Arg
>WENV181245074
OFFI01011391
263765
Bacillota
TAC
Val
>WENV181244683
OFFI01000597
18852
Bacillota
GCT
Ser
>WENV181245033
OFFI01008609
245386
Bacillota
CCA
Trp
>WENV181245256
OFFI01048866
85288
Bacillota
GTA
Tyr
>WENV181245045
OFFI01009476
256380
Bacillota
>WENV181244785
OFFI01001130
147276
Bacillota
CCT
Arg
>WENV181245025
OFFI01008268
157838
Bacillota
GTC
Asp
>WENV181244602
OFFI01000319
279755
Bacillota
GTC
Asp
>WENV181244609
OFFI01000319
279755
Bacillota
GTC
Asp
>WENV181245064
OFFI01010932
238974
Bacillota
GAA
Phe
>WENV181244606
OFFI01000319
16595
Bacillota
GCT
Ser
>WENV181244599
OFFI01000319
3271
Bacillota
GGA
Ser
>WENV181245068
OFFI01011087
299139
Bacillota
TGC
Ala
>WENV181245186
OFFI01029100
414486
Bacillota
CCC
Gly
>WENV181244617
OFFI01000325
272488
Bacillota
GAA
Phe
>WENV181245257
OFFI01048866
412118
Bacillota
>WENV181244611
OFFI01000319
45160
Bacillota
CAA
Leu
>WENV181245065
OFFI01011026
119513
Bacillota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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