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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181281142
OFGO01012636
237957
Bacillota
GTT
Asn
>WENV181281373
OFGO01050841
202812
Bacillota
CAT
Met
>WENV181280871
OFGO01002591
240192
Bacillota
CTG
Gln
>WENV181280852
OFGO01002429
147487
Bacillota
ACG
Arg
>WENV181281044
OFGO01006497
235154
Bacillota
GTT
Asn
>WENV181281123
OFGO01010571
235294
Bacillota
TGC
Ala
>WENV181280846
OFGO01002429
237265
Bacillota
TAC
Val
>WENV181281128
OFGO01010913
313331
Bacillota
CTC
Glu
>WENV181280534
OFGO01000518
302152
Bacillota
CTT
Lys
>WENV181280555
OFGO01000579
302152
Bacillota
CTT
Lys
>WENV181280556
OFGO01000579
302152
Bacillota
CTT
Lys
>WENV181280347
OFGO01000122
16359
Bacillota
CGA
Ser
>WENV181281145
OFGO01012636
247786
Bacillota
CGT
Thr
>WENV181280666
OFGO01001098
313454
Bacillota
GAA
Phe
>WENV181280278
OFGO01000041
41154
Bacillota
TAA
Leu
>WENV181281414
OFGO01070023
384188
Bacillota
TTC
Glu
>WENV181280471
OFGO01000378
156937
Bacillota
GTG
His
>WENV181281006
OFGO01005029
247747
Bacillota
GGT
Thr
>WENV181280910
OFGO01003246
96360
Bacillota
GTA
Tyr
>WENV181281395
OFGO01058044
9848
Bacillota
TGA
Ser
>WENV181280545
OFGO01000552
37269
Bacillota
TGA
Ser
>WENV181281368
OFGO01048272
340131
Bacillota
GTT
Asn
>WENV181280612
OFGO01000850
413152
Bacillota
TCC
Gly
>WENV181281144
OFGO01012636
390525
Bacillota
TTC
Glu
>WENV181280457
OFGO01000343
162445
Bacillota
CAT
Met
>WENV181281345
OFGO01040068
201704
Bacillota
GAT
Ile
>WENV181280847
OFGO01002429
240190
Bacillota
TTT
Lys
>WENV181280277
OFGO01000041
100326
Bacillota
GTA
Tyr
>WENV181280268
OFGO01000031
147684
Bacillota
ACG
Arg
>WENV181280525
OFGO01000500
147684
Bacillota
ACG
Arg
>WENV181280678
OFGO01001135
147684
Bacillota
ACG
Arg
>WENV181281289
OFGO01026382
147684
Bacillota
ACG
Arg
>WENV181280860
OFGO01002537
263765
Bacillota
TAC
Val
>WENV181280990
OFGO01004531
263765
Bacillota
TAC
Val
>WENV181280370
OFGO01000146
18852
Bacillota
GCT
Ser
>WENV181280600
OFGO01000799
85288
Bacillota
GTA
Tyr
>WENV181280685
OFGO01001157
298639
Bacillota
GTT
Asn
>WENV181280667
OFGO01001098
235127
Bacillota
TTT
Lys
>WENV181280761
OFGO01001619
147276
Bacillota
CCT
Arg
>WENV181281397
OFGO01058044
279755
Bacillota
GTC
Asp
>WENV181281146
OFGO01012683
247734
Bacillota
TGC
Ala
>WENV181280407
OFGO01000224
238974
Bacillota
GAA
Phe
>WENV181280849
OFGO01002429
247849
Bacillota
TGT
Thr
>WENV181281143
OFGO01012636
3271
Bacillota
GGA
Ser
>WENV181281138
OFGO01012316
299139
Bacillota
TGC
Ala
>WENV181280729
OFGO01001416
412118
Bacillota
>WENV181280733
OFGO01001416
45160
Bacillota
CAA
Leu
>WENV181281175
OFGO01013658
7065
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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