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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181283732
OFGQ01016088
237957
Bacillota
GTT
Asn
>WENV181283358
OFGQ01002573
240192
Bacillota
CTG
Gln
>WENV181283266
OFGQ01001688
37213
Bacillota
TGA
Ser
>WENV181282878
OFGQ01000096
339890
Bacillota
TTG
Gln
>WENV181283446
OFGQ01003671
147487
Bacillota
ACG
Arg
>WENV181282876
OFGQ01000096
148239
Bacillota
TCT
Arg
>WENV181283089
OFGQ01000756
148239
Bacillota
TCT
Arg
>WENV181283935
OFGQ01049681
238489
Bacillota
GTC
Asp
>WENV181283534
OFGQ01005785
235154
Bacillota
GTT
Asn
>WENV181282994
OFGQ01000298
59312
Bacillota
CAG
Leu
>WENV181283917
OFGQ01047013
243346
Bacillota
TGC
Ala
>WENV181283166
OFGQ01001146
338147
Bacillota
CTC
Glu
>WENV181283091
OFGQ01000756
340802
Bacillota
TTG
Gln
>WENV181283774
OFGQ01020005
340802
Bacillota
TTG
Gln
>WENV181283440
OFGQ01003671
237265
Bacillota
TAC
Val
>WENV181283720
OFGQ01015718
147840
Bacillota
CAT
Met
>WENV181282895
OFGQ01000113
16359
Bacillota
CGA
Ser
>WENV181282932
OFGQ01000164
339803
Bacillota
TTG
Gln
>WENV181283735
OFGQ01016088
247786
Bacillota
CGT
Thr
>WENV181283734
OFGQ01016088
339151
Bacillota
TTC
Glu
>WENV181283936
OFGQ01049681
238151
Bacillota
>WENV181283442
OFGQ01003671
96015
Bacillota
TAG
Leu
>WENV181283532
OFGQ01005748
247747
Bacillota
GGT
Thr
>WENV181283305
OFGQ01002072
96360
Bacillota
GTA
Tyr
>WENV181282931
OFGQ01000164
80836
Bacillota
GTA
Tyr
>WENV181283225
OFGQ01001388
16266
Bacillota
GCT
Ser
>WENV181283633
OFGQ01010578
16266
Bacillota
GCT
Ser
>WENV181282854
OFGQ01000074
235929
Bacillota
CTG
Gln
>WENV181283618
OFGQ01009708
413152
Bacillota
TCC
Gly
>WENV181283871
OFGQ01036579
242750
Bacillota
TAC
Val
>WENV181283190
OFGQ01001239
237266
Bacillota
GTG
His
>WENV181283441
OFGQ01003671
240190
Bacillota
TTT
Lys
>WENV181282877
OFGQ01000096
144610
Bacillota
GTG
His
>WENV181283883
OFGQ01038042
144610
Bacillota
GTG
His
>WENV181283153
OFGQ01001051
147684
Bacillota
ACG
Arg
>WENV181283391
OFGQ01002874
235095
Bacillota
GGT
Thr
>WENV181283931
OFGQ01049681
146741
Bacillota
CAT
Met
>WENV181283725
OFGQ01015718
339391
Bacillota
TTC
Glu
>WENV181282879
OFGQ01000096
235127
Bacillota
TTT
Lys
>WENV181283236
OFGQ01001475
147276
Bacillota
CCT
Arg
>WENV181282772
OFGQ01000016
238974
Bacillota
GAA
Phe
>WENV181283933
OFGQ01049681
6950
Bacillota
TGA
Ser
>WENV181283443
OFGQ01003671
247849
Bacillota
TGT
Thr
>WENV181283733
OFGQ01016088
3271
Bacillota
GGA
Ser
>WENV181283679
OFGQ01013277
414486
Bacillota
CCC
Gly
>WENV181283189
OFGQ01001239
412118
Bacillota
>WENV181283193
OFGQ01001239
45160
Bacillota
CAA
Leu
>WENV181283781
OFGQ01020556
119513
Bacillota
CAA
Leu
>WENV181283036
OFGQ01000470
238945
Bacillota
GCC
Gly
>WENV181283053
OFGQ01000519
238945
Bacillota
GCC
Gly
>WENV181283724
OFGQ01015718
7065
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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