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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
145 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181337091
OFME01000447
144612
Bacillota
TCT
Arg
>WENV181337117
OFME01000503
144612
Bacillota
TCT
Arg
>WENV181337196
OFME01000889
144612
Bacillota
TCT
Arg
>WENV181337540
OFME01007789
235134
Bacillota
GAA
Phe
>WENV181337428
OFME01003551
267556
Bacillota
TAC
Val
>WENV181336824
OFME01000061
246392
Bacillota
GTT
Asn
>WENV181337104
OFME01000482
235098
Bacillota
GAC
Val
>WENV181337109
OFME01000496
235098
Bacillota
GAC
Val
>WENV181337162
OFME01000715
235098
Bacillota
GAC
Val
>WENV181337186
OFME01000830
235098
Bacillota
GAC
Val
>WENV181337606
OFME01014205
338152
Bacillota
TTC
Glu
>WENV181336871
OFME01000099
340263
Bacillota
TTC
Glu
>WENV181337111
OFME01000497
340263
Bacillota
TTC
Glu
>WENV181337223
OFME01001008
235154
Bacillota
GTT
Asn
>WENV181337033
OFME01000288
425593
Bacillota
CCC
Gly
>WENV181336772
OFME01000026
37549
Bacillota
TAA
Leu
>WENV181336864
OFME01000099
148348
Bacillota
GTC
Asp
>WENV181337113
OFME01000497
148348
Bacillota
GTC
Asp
>WENV181337695
OFME01028222
246023
Bacillota
TGC
Ala
>WENV181336949
OFME01000177
59312
Bacillota
CAG
Leu
>WENV181336731
OFME01000008
193585
Bacillota
CGG
Pro
>WENV181336897
OFME01000135
193585
Bacillota
CGG
Pro
>WENV181336895
OFME01000127
239080
Bacillota
CTG
Gln
>WENV181337260
OFME01001206
238910
Bacillota
CTT
Lys
>WENV181336707
OFME01000002
243119
Bacillota
CTT
Lys
>WENV181337413
OFME01002985
338147
Bacillota
CTC
Glu
>WENV181337367
OFME01002525
338147
Bacillota
CTC
Glu
>WENV181337368
OFME01002525
338147
Bacillota
CTC
Glu
>WENV181336773
OFME01000026
152047
Bacillota
GGG
Pro
>WENV181337124
OFME01000524
155273
Bacillota
CAT
Met
>WENV181336727
OFME01000008
16820
Bacillota
GCT
Ser
>WENV181337415
OFME01003019
235294
Bacillota
TGC
Ala
>WENV181336920
OFME01000154
152512
Bacillota
CCT
Arg
>WENV181336768
OFME01000026
152459
Bacillota
GTC
Asp
>WENV181336843
OFME01000083
152459
Bacillota
GTC
Asp
>WENV181336846
OFME01000083
152459
Bacillota
GTC
Asp
>WENV181336912
OFME01000149
182792
Bacillota
GTC
Asp
>WENV181336987
OFME01000215
182792
Bacillota
GTC
Asp
>WENV181337098
OFME01000461
182792
Bacillota
GTC
Asp
>WENV181337382
OFME01002595
41154
Bacillota
TAA
Leu
>WENV181337052
OFME01000334
44859
Bacillota
AAG
Leu
>WENV181336959
OFME01000189
11034
Bacillota
GGA
Ser
>WENV181337090
OFME01000443
11034
Bacillota
GGA
Ser
>WENV181336911
OFME01000149
235117
Bacillota
TAC
Val
>WENV181337464
OFME01004830
235117
Bacillota
TAC
Val
>WENV181336865
OFME01000099
239076
Bacillota
GAA
Phe
>WENV181337114
OFME01000497
239076
Bacillota
GAA
Phe
>WENV181337463
OFME01004830
338440
Bacillota
TTC
Glu
>WENV181336732
OFME01000008
10943
Bacillota
GGA
Ser
>WENV181336898
OFME01000135
10943
Bacillota
GGA
Ser
>WENV181336729
OFME01000008
342736
Bacillota
TTG
Gln
>WENV181336913
OFME01000149
235079
Bacillota
GAA
Phe
>WENV181336985
OFME01000215
235079
Bacillota
GAA
Phe
>WENV181336825
OFME01000061
269634
Bacillota
TTC
Glu
>WENV181336770
OFME01000026
340265
Bacillota
GCC
Gly
>WENV181336803
OFME01000042
340265
Bacillota
GCC
Gly
>WENV181336841
OFME01000076
340265
Bacillota
GCC
Gly
>WENV181336909
OFME01000148
340265
Bacillota
GCC
Gly
>WENV181337169
OFME01000765
340265
Bacillota
GCC
Gly
>WENV181337216
OFME01000984
340265
Bacillota
GCC
Gly
>WENV181337525
OFME01007281
16266
Bacillota
GCT
Ser
>WENV181336708
OFME01000002
152513
Bacillota
GAC
Val
>WENV181336883
OFME01000116
152513
Bacillota
GAC
Val
>WENV181337102
OFME01000481
338149
Bacillota
CTC
Glu
>WENV181337084
OFME01000410
245298
Bacillota
CGG
Pro
>WENV181337232
OFME01001082
245298
Bacillota
CGG
Pro
>WENV181337240
OFME01001135
37269
Bacillota
TGA
Ser
>WENV181337753
OFME01041445
155089
Bacillota
CAT
Met
>WENV181336709
OFME01000002
37551
Bacillota
CGA
Ser
>WENV181336845
OFME01000083
81644
Bacillota
GAG
Leu
>WENV181336847
OFME01000083
81644
Bacillota
GAG
Leu
>WENV181337763
OFME01042580
413152
Bacillota
TCC
Gly
>WENV181337034
OFME01000292
152492
Bacillota
GGG
Pro
>WENV181337315
OFME01001841
100326
Bacillota
GTA
Tyr
>WENV181336936
OFME01000164
411547
Bacillota
CTG
Gln
>WENV181337060
OFME01000352
411547
Bacillota
CTG
Gln
>WENV181337083
OFME01000410
411547
Bacillota
CTG
Gln
>WENV181337231
OFME01001082
411547
Bacillota
CTG
Gln
>WENV181337537
OFME01007741
411547
Bacillota
CTG
Gln
>WENV181337293
OFME01001506
147684
Bacillota
ACG
Arg
>WENV181337679
OFME01024832
147684
Bacillota
ACG
Arg
>WENV181337238
OFME01001129
412387
Bacillota
GCA
Cys
>WENV181337011
OFME01000251
235095
Bacillota
GGT
Thr
>WENV181337099
OFME01000461
235095
Bacillota
GGT
Thr
>WENV181336771
OFME01000026
419945
Bacillota
GCA
Cys
>WENV181337603
OFME01013938
241471
Bacillota
TGC
Ala
>WENV181337123
OFME01000519
185292
Bacillota
ACG
Arg
>WENV181336740
OFME01000010
419639
Bacillota
GCA
Cys
>WENV181337170
OFME01000765
419639
Bacillota
GCA
Cys
>WENV181337112
OFME01000497
239079
Bacillota
TAC
Val
>WENV181337115
OFME01000497
239079
Bacillota
TAC
Val
>WENV181336858
OFME01000096
411549
Bacillota
TTG
Gln
>WENV181336925
OFME01000154
152045
Bacillota
CAT
Met
>WENV181336842
OFME01000083
37588
Bacillota
TGA
Ser
>WENV181337388
OFME01002784
148188
Bacillota
CCG
Arg
>WENV181337418
OFME01003041
148188
Bacillota
CCG
Arg
>WENV181336712
OFME01000002
152046
Bacillota
TCT
Arg
>WENV181337194
OFME01000878
80612
Bacillota
GTA
Tyr
>WENV181336733
OFME01000008
152051
Bacillota
ACG
Arg
>WENV181337009
OFME01000249
243401
Bacillota
CGT
Thr
>WENV181337788
OFME01052807
241432
Bacillota
TGT
Thr
>WENV181336947
OFME01000176
235124
Bacillota
TGG
Pro
>WENV181337347
OFME01002245
235124
Bacillota
TGG
Pro
>WENV181337349
OFME01002270
338129
Bacillota
TGT
Thr
>WENV181336907
OFME01000142
144652
Bacillota
GTC
Asp
>WENV181337252
OFME01001190
419877
Bacillota
TCC
Gly
>WENV181337772
OFME01043649
235171
Bacillota
CCA
Trp
>WENV181336882
OFME01000115
238974
Bacillota
GAA
Phe
>WENV181337156
OFME01000700
238974
Bacillota
GAA
Phe
>WENV181337061
OFME01000353
144621
Bacillota
GTT
Asn
>WENV181337103
OFME01000481
144621
Bacillota
GTT
Asn
>WENV181337148
OFME01000662
144621
Bacillota
GTT
Asn
>WENV181336836
OFME01000068
235113
Bacillota
GAA
Phe
>WENV181336697
OFME01000001
243098
Bacillota
GGT
Thr
>WENV181337093
OFME01000447
58712
Bacillota
CAG
Leu
>WENV181337363
OFME01002468
58712
Bacillota
CAG
Leu
>WENV181336915
OFME01000149
245296
Bacillota
CCC
Gly
>WENV181337152
OFME01000678
245296
Bacillota
CCC
Gly
>WENV181337441
OFME01004005
272992
Bacillota
CTT
Lys
>WENV181337110
OFME01000497
239078
Bacillota
TTT
Lys
>WENV181336739
OFME01000010
344240
Bacillota
GCC
Gly
>WENV181336743
OFME01000010
344240
Bacillota
GCC
Gly
>WENV181336760
OFME01000020
344240
Bacillota
GCC
Gly
>WENV181337167
OFME01000765
152497
Bacillota
GTC
Asp
>WENV181337215
OFME01000984
152497
Bacillota
GTC
Asp
>WENV181336924
OFME01000154
281472
Bacillota
GGT
Thr
>WENV181337029
OFME01000284
343021
Bacillota
CAT
Met
>WENV181336999
OFME01000239
144594
Bacillota
CAC
Val
>WENV181337021
OFME01000271
152018
Bacillota
CCT
Arg
>WENV181336992
OFME01000221
272488
Bacillota
GAA
Phe
>WENV181337258
OFME01001197
272488
Bacillota
GAA
Phe
>WENV181337398
OFME01002885
114075
Bacillota
TAG
Leu
>WENV181337376
OFME01002551
292012
Bacillota
TGC
Ala
>WENV181337204
OFME01000933
238945
Bacillota
GCC
Gly
>WENV181337371
OFME01002535
238945
Bacillota
GCC
Gly
>WENV181336910
OFME01000149
249259
Bacillota
GCC
Gly
>WENV181336914
OFME01000149
249259
Bacillota
GCC
Gly
>WENV181336986
OFME01000215
249259
Bacillota
GCC
Gly
>WENV181336988
OFME01000215
249259
Bacillota
GCC
Gly
>WENV181337004
OFME01000245
287034
Bacillota
GTT
Asn
>WENV181337076
OFME01000383
413179
Bacillota
CCC
Gly
>WENV181337545
OFME01008119
273862
Bacillota
TGC
Ala
>WENV181336738
OFME01000010
245344
Bacillota
GAA
Phe
>WENV181336931
OFME01000156
245344
Bacillota
GAA
Phe
>WENV181337731
OFME01036133
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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