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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181412593
OGCK01002273
236013
Gammaproteobacteria
TGC
Ala
>WENV181412602
OGCK01002452
236013
Gammaproteobacteria
TGC
Ala
>WENV181413603
OGCK01095663
236013
Gammaproteobacteria
TGC
Ala
>WENV181413569
OGCK01089010
276072
Gammaproteobacteria
>WENV181413775
OGCK01134277
241478
Gammaproteobacteria
TGT
Thr
>WENV181413451
OGCK01072016
145369
Gammaproteobacteria
CGG
Pro
>WENV181412586
OGCK01002121
270849
Gammaproteobacteria
TTC
Glu
>WENV181413602
OGCK01095663
185755
Gammaproteobacteria
GAT
Ile
>WENV181412448
OGCK01000354
164812
Gammaproteobacteria
GAT
Ile
>WENV181412808
OGCK01009097
264150
Gammaproteobacteria
TGT
Thr
>WENV181414008
OGCK01194696
264150
Gammaproteobacteria
TGT
Thr
>WENV181413067
OGCK01024960
237421
Gammaproteobacteria
TGT
Thr
>WENV181412483
OGCK01000566
257778
Gammaproteobacteria
TAC
Val
>WENV181413135
OGCK01032107
257778
Gammaproteobacteria
TAC
Val
>WENV181413886
OGCK01163457
97795
Gammaproteobacteria
GTA
Tyr
>WENV181412440
OGCK01000313
251608
Gammaproteobacteria
GAA
Phe
>WENV181412556
OGCK01001498
251608
Gammaproteobacteria
GAA
Phe
>WENV181413166
OGCK01034703
411735
Gammaproteobacteria
GCA
Cys
>WENV181412502
OGCK01000933
45152
Gammaproteobacteria
GGA
Ser
>WENV181412519
OGCK01001186
17666
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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