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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181472191
OGEZ01000325
196621
Bacillota
GTC
Asp
>WENV181472210
OGEZ01000349
196621
Bacillota
GTC
Asp
>WENV181472535
OGEZ01002190
16842
Bacillota
CGA
Ser
>WENV181471961
OGEZ01000063
144612
Bacillota
TCT
Arg
>WENV181472592
OGEZ01003539
238169
Bacillota
AGT
Thr
>WENV181472149
OGEZ01000259
154063
Bacillota
CGG
Pro
>WENV181472144
OGEZ01000241
235098
Bacillota
GAC
Val
>WENV181472367
OGEZ01000834
235098
Bacillota
GAC
Val
>WENV181472688
OGEZ01010913
235098
Bacillota
GAC
Val
>WENV181472087
OGEZ01000195
148239
Bacillota
TCT
Arg
>WENV181472142
OGEZ01000239
44854
Bacillota
TGA
Ser
>WENV181472643
OGEZ01005640
235154
Bacillota
GTT
Asn
>WENV181472235
OGEZ01000379
429443
Bacillota
GCA
Cys
>WENV181471943
OGEZ01000049
59312
Bacillota
CAG
Leu
>WENV181472580
OGEZ01003381
238910
Bacillota
CTT
Lys
>WENV181472553
OGEZ01002597
243119
Bacillota
CTT
Lys
>WENV181471886
OGEZ01000003
338147
Bacillota
CTC
Glu
>WENV181471887
OGEZ01000003
338147
Bacillota
CTC
Glu
>WENV181471888
OGEZ01000003
338147
Bacillota
CTC
Glu
>WENV181472713
OGEZ01012609
152047
Bacillota
GGG
Pro
>WENV181472040
OGEZ01000142
155273
Bacillota
CAT
Met
>WENV181472130
OGEZ01000232
293599
Bacillota
CTT
Lys
>WENV181472758
OGEZ01027285
341763
Bacillota
CTC
Glu
>WENV181472585
OGEZ01003431
127105
Bacillota
GTG
His
>WENV181472451
OGEZ01001372
429429
Bacillota
CCA
Trp
>WENV181472203
OGEZ01000339
16834
Bacillota
GCT
Ser
>WENV181472522
OGEZ01002007
11034
Bacillota
GGA
Ser
>WENV181472190
OGEZ01000325
235117
Bacillota
TAC
Val
>WENV181472505
OGEZ01001864
114002
Bacillota
CAA
Leu
>WENV181472320
OGEZ01000628
274189
Bacillota
TGT
Thr
>WENV181472453
OGEZ01001376
37437
Bacillota
TAA
Leu
>WENV181472192
OGEZ01000325
235079
Bacillota
GAA
Phe
>WENV181472755
OGEZ01025397
296878
Bacillota
GTT
Asn
>WENV181471969
OGEZ01000065
295714
Bacillota
GCC
Gly
>WENV181472654
OGEZ01006199
173314
Bacillota
GAT
Ile
>WENV181472447
OGEZ01001360
243612
Bacillota
TAC
Val
>WENV181472026
OGEZ01000126
338149
Bacillota
CTC
Glu
>WENV181472046
OGEZ01000145
245298
Bacillota
CGG
Pro
>WENV181472751
OGEZ01023164
413152
Bacillota
TCC
Gly
>WENV181472175
OGEZ01000306
147135
Bacillota
ACG
Arg
>WENV181472338
OGEZ01000715
235078
Bacillota
TAC
Val
>WENV181472342
OGEZ01000715
235078
Bacillota
TAC
Val
>WENV181472675
OGEZ01008653
148268
Bacillota
CGG
Pro
>WENV181471892
OGEZ01000005
100326
Bacillota
GTA
Tyr
>WENV181472078
OGEZ01000187
100326
Bacillota
GTA
Tyr
>WENV181472088
OGEZ01000195
144610
Bacillota
GTG
His
>WENV181472341
OGEZ01000715
240017
Bacillota
GCC
Gly
>WENV181472345
OGEZ01000715
240017
Bacillota
GCC
Gly
>WENV181472045
OGEZ01000145
411547
Bacillota
CTG
Gln
>WENV181472114
OGEZ01000213
411547
Bacillota
CTG
Gln
>WENV181472143
OGEZ01000239
4624
Bacillota
GCT
Ser
>WENV181472403
OGEZ01001030
342895
Bacillota
CAT
Met
>WENV181472457
OGEZ01001403
18852
Bacillota
GCT
Ser
>WENV181472207
OGEZ01000349
235095
Bacillota
GGT
Thr
>WENV181472211
OGEZ01000349
235095
Bacillota
GGT
Thr
>WENV181472530
OGEZ01002160
194150
Bacillota
TGG
Pro
>WENV181472044
OGEZ01000145
411549
Bacillota
TTG
Gln
>WENV181472259
OGEZ01000465
148188
Bacillota
CCG
Arg
>WENV181472757
OGEZ01026344
152046
Bacillota
TCT
Arg
>WENV181471958
OGEZ01000061
80612
Bacillota
GTA
Tyr
>WENV181472152
OGEZ01000261
80612
Bacillota
GTA
Tyr
>WENV181472432
OGEZ01001280
235197
Bacillota
GTC
Asp
>WENV181472537
OGEZ01002232
241432
Bacillota
TGT
Thr
>WENV181472398
OGEZ01001005
235124
Bacillota
TGG
Pro
>WENV181472131
OGEZ01000233
338129
Bacillota
TGT
Thr
>WENV181472436
OGEZ01001317
243613
Bacillota
GTG
His
>WENV181471993
OGEZ01000093
144583
Bacillota
ACG
Arg
>WENV181472209
OGEZ01000349
235171
Bacillota
CCA
Trp
>WENV181472483
OGEZ01001561
238974
Bacillota
GAA
Phe
>WENV181471946
OGEZ01000050
144621
Bacillota
GTT
Asn
>WENV181472027
OGEZ01000126
144621
Bacillota
GTT
Asn
>WENV181472518
OGEZ01001977
152491
Bacillota
CAT
Met
>WENV181471959
OGEZ01000061
58712
Bacillota
CAG
Leu
>WENV181472099
OGEZ01000197
58712
Bacillota
CAG
Leu
>WENV181472000
OGEZ01000096
245296
Bacillota
CCC
Gly
>WENV181472404
OGEZ01001047
272992
Bacillota
CTT
Lys
>WENV181472630
OGEZ01004570
59664
Bacillota
CAG
Leu
>WENV181472514
OGEZ01001977
273029
Bacillota
TGT
Thr
>WENV181472517
OGEZ01001977
281472
Bacillota
GGT
Thr
>WENV181472440
OGEZ01001332
144594
Bacillota
CAC
Val
>WENV181472563
OGEZ01002990
413657
Bacillota
CCC
Gly
>WENV181472609
OGEZ01004012
238224
Bacillota
TTT
Lys
>WENV181472445
OGEZ01001360
287034
Bacillota
GTT
Asn
>WENV181472437
OGEZ01001317
343027
Bacillota
TTG
Gln
>WENV181472261
OGEZ01000465
338128
Bacillota
TTC
Glu
>WENV181472417
OGEZ01001130
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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