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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181563226
OGJG01009122
237957
Bacillota
GTT
Asn
>WENV181563398
OGJG01030827
283807
Bacillota
TAC
Val
>WENV181562877
OGJG01000209
144612
Bacillota
TCT
Arg
>WENV181563042
OGJG01001248
144612
Bacillota
TCT
Arg
>WENV181563088
OGJG01002108
267649
Bacillota
TAC
Val
>WENV181563113
OGJG01002327
339890
Bacillota
TTG
Gln
>WENV181562957
OGJG01000508
235098
Bacillota
GAC
Val
>WENV181562999
OGJG01000768
235098
Bacillota
GAC
Val
>WENV181563137
OGJG01003317
235098
Bacillota
GAC
Val
>WENV181562950
OGJG01000474
44854
Bacillota
TGA
Ser
>WENV181563230
OGJG01009122
238489
Bacillota
GTC
Asp
>WENV181563198
OGJG01006459
246023
Bacillota
TGC
Ala
>WENV181563095
OGJG01002146
277175
Bacillota
CTT
Lys
>WENV181563443
OGJG01040447
235137
Bacillota
TGC
Ala
>WENV181563441
OGJG01039493
241761
Bacillota
TAC
Val
>WENV181563311
OGJG01016705
149311
Bacillota
CCT
Arg
>WENV181563169
OGJG01004545
149310
Bacillota
TCT
Arg
>WENV181563282
OGJG01012402
182792
Bacillota
GTC
Asp
>WENV181563394
OGJG01030728
339803
Bacillota
TTG
Gln
>WENV181563173
OGJG01004738
41154
Bacillota
TAA
Leu
>WENV181562837
OGJG01000110
11034
Bacillota
GGA
Ser
>WENV181563228
OGJG01009122
339151
Bacillota
TTC
Glu
>WENV181563231
OGJG01009122
238151
Bacillota
>WENV181562887
OGJG01000245
114002
Bacillota
CAA
Leu
>WENV181562913
OGJG01000330
114002
Bacillota
CAA
Leu
>WENV181563313
OGJG01017074
114002
Bacillota
CAA
Leu
>WENV181563060
OGJG01001486
37437
Bacillota
TAA
Leu
>WENV181563146
OGJG01003764
37437
Bacillota
TAA
Leu
>WENV181563263
OGJG01011008
37437
Bacillota
TAA
Leu
>WENV181563280
OGJG01012402
235079
Bacillota
GAA
Phe
>WENV181563227
OGJG01009122
7070
Bacillota
GGA
Ser
>WENV181563425
OGJG01036184
173314
Bacillota
GAT
Ile
>WENV181562785
OGJG01000038
243612
Bacillota
TAC
Val
>WENV181563010
OGJG01000842
243612
Bacillota
TAC
Val
>WENV181563116
OGJG01002340
338149
Bacillota
CTC
Glu
>WENV181563202
OGJG01006591
338149
Bacillota
CTC
Glu
>WENV181563045
OGJG01001283
245298
Bacillota
CGG
Pro
>WENV181563466
OGJG01047715
287000
Bacillota
GTT
Asn
>WENV181563038
OGJG01001168
169968
Bacillota
CAT
Met
>WENV181563083
OGJG01001948
149309
Bacillota
CGG
Pro
>WENV181562905
OGJG01000312
147135
Bacillota
ACG
Arg
>WENV181563326
OGJG01018176
147135
Bacillota
ACG
Arg
>WENV181562911
OGJG01000327
411547
Bacillota
CTG
Gln
>WENV181563044
OGJG01001283
411547
Bacillota
CTG
Gln
>WENV181563072
OGJG01001618
411547
Bacillota
CTG
Gln
>WENV181562951
OGJG01000474
4624
Bacillota
GCT
Ser
>WENV181563251
OGJG01009810
342895
Bacillota
CAT
Met
>WENV181563266
OGJG01011329
342895
Bacillota
CAT
Met
>WENV181563124
OGJG01002414
412387
Bacillota
GCA
Cys
>WENV181563018
OGJG01000923
235095
Bacillota
GGT
Thr
>WENV181563035
OGJG01001154
235095
Bacillota
GGT
Thr
>WENV181563265
OGJG01011301
194150
Bacillota
TGG
Pro
>WENV181563260
OGJG01011008
250349
Bacillota
GAA
Phe
>WENV181563021
OGJG01001005
411549
Bacillota
TTG
Gln
>WENV181563090
OGJG01002116
411549
Bacillota
TTG
Gln
>WENV181563008
OGJG01000842
235701
Bacillota
TTT
Lys
>WENV181563232
OGJG01009122
85288
Bacillota
GTA
Tyr
>WENV181563234
OGJG01009122
240193
Bacillota
GTG
His
>WENV181562872
OGJG01000188
148188
Bacillota
CCG
Arg
>WENV181563106
OGJG01002314
148188
Bacillota
CCG
Arg
>WENV181562961
OGJG01000540
80612
Bacillota
GTA
Tyr
>WENV181563092
OGJG01002125
80612
Bacillota
GTA
Tyr
>WENV181563259
OGJG01011008
235197
Bacillota
GTC
Asp
>WENV181563261
OGJG01011008
368876
Bacillota
GCC
Gly
>WENV181562995
OGJG01000754
235124
Bacillota
TGG
Pro
>WENV181563187
OGJG01005721
235124
Bacillota
TGG
Pro
>WENV181563353
OGJG01021335
16596
Bacillota
CGA
Ser
>WENV181563331
OGJG01018804
59727
Bacillota
CAG
Leu
>WENV181562971
OGJG01000599
144583
Bacillota
ACG
Arg
>WENV181562933
OGJG01000414
144621
Bacillota
GTT
Asn
>WENV181563117
OGJG01002340
144621
Bacillota
GTT
Asn
>WENV181563203
OGJG01006591
144621
Bacillota
GTT
Asn
>WENV181563225
OGJG01009044
277200
Bacillota
GGC
Ala
>WENV181563358
OGJG01021516
152491
Bacillota
CAT
Met
>WENV181562962
OGJG01000540
58712
Bacillota
CAG
Leu
>WENV181563029
OGJG01001057
245296
Bacillota
CCC
Gly
>WENV181563239
OGJG01009215
245296
Bacillota
CCC
Gly
>WENV181563183
OGJG01005618
272992
Bacillota
CTT
Lys
>WENV181563354
OGJG01021516
273029
Bacillota
TGT
Thr
>WENV181563357
OGJG01021516
281472
Bacillota
GGT
Thr
>WENV181562827
OGJG01000087
178024
Bacillota
TCT
Arg
>WENV181563119
OGJG01002352
144594
Bacillota
CAC
Val
>WENV181562745
OGJG01000009
413657
Bacillota
CCC
Gly
>WENV181563215
OGJG01007902
413657
Bacillota
CCC
Gly
>WENV181563235
OGJG01009122
375269
Bacillota
TTG
Gln
>WENV181563147
OGJG01003771
272488
Bacillota
GAA
Phe
>WENV181563039
OGJG01001168
272488
Bacillota
GAA
Phe
>WENV181563233
OGJG01009122
412118
Bacillota
>WENV181563237
OGJG01009122
45160
Bacillota
CAA
Leu
>WENV181563380
OGJG01028212
146770
Bacillota
TTC
Glu
>WENV181563418
OGJG01033673
238945
Bacillota
GCC
Gly
>WENV181563281
OGJG01012402
249259
Bacillota
GCC
Gly
>WENV181563283
OGJG01012402
249259
Bacillota
GCC
Gly
>WENV181562874
OGJG01000188
338128
Bacillota
TTC
Glu
>WENV181563017
OGJG01000917
338128
Bacillota
TTC
Glu
>WENV181563241
OGJG01009236
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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