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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181746556
OGQN01002009
144612
Bacillota
TCT
Arg
>WENV181746653
OGQN01002624
144612
Bacillota
TCT
Arg
>WENV181747039
OGQN01009717
144612
Bacillota
TCT
Arg
>WENV181746692
OGQN01003054
154063
Bacillota
CGG
Pro
>WENV181747549
OGQN01049584
37222
Bacillota
>WENV181746090
OGQN01000283
339890
Bacillota
TTG
Gln
>WENV181746161
OGQN01000384
235098
Bacillota
GAC
Val
>WENV181746305
OGQN01000718
235098
Bacillota
GAC
Val
>WENV181746409
OGQN01001231
235098
Bacillota
GAC
Val
>WENV181746968
OGQN01007073
235098
Bacillota
GAC
Val
>WENV181747440
OGQN01031973
338152
Bacillota
TTC
Glu
>WENV181747644
OGQN01077066
338152
Bacillota
TTC
Glu
>WENV181746781
OGQN01004156
237387
Bacillota
TGT
Thr
>WENV181746306
OGQN01000731
152156
Bacillota
TGG
Pro
>WENV181746404
OGQN01001199
44854
Bacillota
TGA
Ser
>WENV181746687
OGQN01002972
44854
Bacillota
TGA
Ser
>WENV181745933
OGQN01000064
235154
Bacillota
GTT
Asn
>WENV181747425
OGQN01030391
144577
Bacillota
GAT
Ile
>WENV181746421
OGQN01001276
411591
Bacillota
GGT
Thr
>WENV181746017
OGQN01000148
59312
Bacillota
CAG
Leu
>WENV181747348
OGQN01022539
339684
Bacillota
CCG
Arg
>WENV181747565
OGQN01051860
243346
Bacillota
TGC
Ala
>WENV181747290
OGQN01018329
238910
Bacillota
CTT
Lys
>WENV181747671
OGQN01091773
338147
Bacillota
CTC
Glu
>WENV181747327
OGQN01020325
235150
Bacillota
TGC
Ala
>WENV181747436
OGQN01031294
412258
Bacillota
CCC
Gly
>WENV181746287
OGQN01000686
340802
Bacillota
TTG
Gln
>WENV181746699
OGQN01003079
340802
Bacillota
TTG
Gln
>WENV181746058
OGQN01000222
235091
Bacillota
CTT
Lys
>WENV181746430
OGQN01001338
11034
Bacillota
GGA
Ser
>WENV181745934
OGQN01000064
339151
Bacillota
TTC
Glu
>WENV181746983
OGQN01007440
235079
Bacillota
GAA
Phe
>WENV181747380
OGQN01025994
235079
Bacillota
GAA
Phe
>WENV181747508
OGQN01043135
238677
Bacillota
AGT
Thr
>WENV181746338
OGQN01000888
16266
Bacillota
GCT
Ser
>WENV181746589
OGQN01002181
338149
Bacillota
CTC
Glu
>WENV181747082
OGQN01011307
338149
Bacillota
CTC
Glu
>WENV181747474
OGQN01037738
245298
Bacillota
CGG
Pro
>WENV181746410
OGQN01001236
37269
Bacillota
TGA
Ser
>WENV181747159
OGQN01013331
37269
Bacillota
TGA
Ser
>WENV181747659
OGQN01083154
155089
Bacillota
CAT
Met
>WENV181746537
OGQN01001916
413152
Bacillota
TCC
Gly
>WENV181746355
OGQN01000943
152492
Bacillota
GGG
Pro
>WENV181746862
OGQN01005157
152492
Bacillota
GGG
Pro
>WENV181747310
OGQN01019628
152492
Bacillota
GGG
Pro
>WENV181746476
OGQN01001601
411547
Bacillota
CTG
Gln
>WENV181746459
OGQN01001516
147684
Bacillota
ACG
Arg
>WENV181746405
OGQN01001199
4624
Bacillota
GCT
Ser
>WENV181746688
OGQN01002972
4624
Bacillota
GCT
Ser
>WENV181746603
OGQN01002252
412387
Bacillota
GCA
Cys
>WENV181746322
OGQN01000800
235095
Bacillota
GGT
Thr
>WENV181746324
OGQN01000800
235095
Bacillota
GGT
Thr
>WENV181746645
OGQN01002575
235095
Bacillota
GGT
Thr
>WENV181746647
OGQN01002575
235095
Bacillota
GGT
Thr
>WENV181745847
OGQN01000020
344183
Bacillota
CTG
Gln
>WENV181746541
OGQN01001918
239832
Bacillota
TGT
Thr
>WENV181746680
OGQN01002860
411549
Bacillota
TTG
Gln
>WENV181747571
OGQN01054662
59296
Bacillota
AAG
Leu
>WENV181746594
OGQN01002200
148188
Bacillota
CCG
Arg
>WENV181746974
OGQN01007128
80612
Bacillota
GTA
Tyr
>WENV181746091
OGQN01000283
235127
Bacillota
TTT
Lys
>WENV181746685
OGQN01002968
235127
Bacillota
TTT
Lys
>WENV181746088
OGQN01000283
147674
Bacillota
TCT
Arg
>WENV181746340
OGQN01000909
241432
Bacillota
TGT
Thr
>WENV181746365
OGQN01001006
235124
Bacillota
TGG
Pro
>WENV181746718
OGQN01003235
235124
Bacillota
TGG
Pro
>WENV181746332
OGQN01000845
338129
Bacillota
TGT
Thr
>WENV181747569
OGQN01053664
237889
Bacillota
CTT
Lys
>WENV181746020
OGQN01000153
149274
Bacillota
>WENV181746723
OGQN01003320
144583
Bacillota
ACG
Arg
>WENV181746320
OGQN01000800
235171
Bacillota
CCA
Trp
>WENV181746648
OGQN01002575
235171
Bacillota
CCA
Trp
>WENV181747321
OGQN01020221
238974
Bacillota
GAA
Phe
>WENV181746451
OGQN01001439
144621
Bacillota
GTT
Asn
>WENV181746514
OGQN01001799
144621
Bacillota
GTT
Asn
>WENV181746590
OGQN01002181
144621
Bacillota
GTT
Asn
>WENV181747083
OGQN01011307
144621
Bacillota
GTT
Asn
>WENV181747051
OGQN01010142
148495
Bacillota
TCT
Arg
>WENV181746558
OGQN01002009
58712
Bacillota
CAG
Leu
>WENV181746909
OGQN01005964
58712
Bacillota
CAG
Leu
>WENV181746973
OGQN01007128
58712
Bacillota
CAG
Leu
>WENV181746265
OGQN01000650
245296
Bacillota
CCC
Gly
>WENV181747591
OGQN01060774
339685
Bacillota
TTG
Gln
>WENV181747397
OGQN01027744
248507
Bacillota
CAT
Met
>WENV181746515
OGQN01001804
144594
Bacillota
CAC
Val
>WENV181747238
OGQN01016018
95563
Bacillota
GTA
Tyr
>WENV181747262
OGQN01016835
147230
Bacillota
GAT
Ile
>WENV181746334
OGQN01000853
119513
Bacillota
CAA
Leu
>WENV181746432
OGQN01001352
238945
Bacillota
GCC
Gly
>WENV181746669
OGQN01002779
238945
Bacillota
GCC
Gly
>WENV181746915
OGQN01006082
238945
Bacillota
GCC
Gly
>WENV181747139
OGQN01012592
238945
Bacillota
GCC
Gly
>WENV181747246
OGQN01016286
238945
Bacillota
GCC
Gly
>WENV181747584
OGQN01058756
157105
Bacillota
GAT
Ile
>WENV181746163
OGQN01000385
338128
Bacillota
TTC
Glu
>WENV181746209
OGQN01000491
338128
Bacillota
TTC
Glu
>WENV181747518
OGQN01044215
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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