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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181942122
OGYY01042576
339630
Bacillota
GCC
Gly
>WENV181941683
OGYY01007023
158247
Bacillota
>WENV181942066
OGYY01031261
158247
Bacillota
>WENV181941568
OGYY01004836
144612
Bacillota
TCT
Arg
>WENV181941733
OGYY01008124
144612
Bacillota
TCT
Arg
>WENV181940866
OGYY01000374
235134
Bacillota
GAA
Phe
>WENV181940910
OGYY01000492
267556
Bacillota
TAC
Val
>WENV181941067
OGYY01000894
267556
Bacillota
TAC
Val
>WENV181941176
OGYY01001352
339890
Bacillota
TTG
Gln
>WENV181941278
OGYY01001975
235098
Bacillota
GAC
Val
>WENV181941411
OGYY01002857
338152
Bacillota
TTC
Glu
>WENV181941851
OGYY01011545
23769
Bacillota
TAA
Leu
>WENV181941137
OGYY01001214
44854
Bacillota
TGA
Ser
>WENV181941362
OGYY01002479
44854
Bacillota
TGA
Ser
>WENV181941867
OGYY01012485
144577
Bacillota
GAT
Ile
>WENV181942131
OGYY01043932
144577
Bacillota
GAT
Ile
>WENV181940932
OGYY01000524
59312
Bacillota
CAG
Leu
>WENV181942081
OGYY01033673
97943
Bacillota
GTA
Tyr
>WENV181940651
OGYY01000074
338147
Bacillota
CTC
Glu
>WENV181940841
OGYY01000341
338147
Bacillota
CTC
Glu
>WENV181941852
OGYY01011651
155273
Bacillota
CAT
Met
>WENV181942128
OGYY01043074
235294
Bacillota
TGC
Ala
>WENV181940589
OGYY01000025
340802
Bacillota
TTG
Gln
>WENV181941076
OGYY01000924
340802
Bacillota
TTG
Gln
>WENV181941624
OGYY01006028
419288
Bacillota
GGT
Thr
>WENV181940598
OGYY01000027
44859
Bacillota
AAG
Leu
>WENV181940905
OGYY01000481
44859
Bacillota
AAG
Leu
>WENV181940930
OGYY01000524
44859
Bacillota
AAG
Leu
>WENV181940931
OGYY01000524
44859
Bacillota
AAG
Leu
>WENV181941352
OGYY01002448
338440
Bacillota
TTC
Glu
>WENV181941149
OGYY01001246
235079
Bacillota
GAA
Phe
>WENV181942130
OGYY01043932
235087
Bacillota
TGC
Ala
>WENV181941809
OGYY01010274
238853
Bacillota
TAC
Val
>WENV181940722
OGYY01000170
173314
Bacillota
GAT
Ile
>WENV181941494
OGYY01003937
271471
Bacillota
GCC
Gly
>WENV181941035
OGYY01000790
245298
Bacillota
CGG
Pro
>WENV181941925
OGYY01017070
39475
Bacillota
TAA
Leu
>WENV181941328
OGYY01002346
169968
Bacillota
CAT
Met
>WENV181941056
OGYY01000879
413152
Bacillota
TCC
Gly
>WENV181940728
OGYY01000172
152149
Bacillota
GTG
His
>WENV181941489
OGYY01003851
162445
Bacillota
CAT
Met
>WENV181941572
OGYY01004968
162445
Bacillota
CAT
Met
>WENV181940814
OGYY01000316
152492
Bacillota
GGG
Pro
>WENV181941616
OGYY01005899
152492
Bacillota
GGG
Pro
>WENV181941647
OGYY01006365
152492
Bacillota
GGG
Pro
>WENV181941455
OGYY01003461
100326
Bacillota
GTA
Tyr
>WENV181941075
OGYY01000924
144610
Bacillota
GTG
His
>WENV181940867
OGYY01000374
240017
Bacillota
GCC
Gly
>WENV181941126
OGYY01001136
240017
Bacillota
GCC
Gly
>WENV181941034
OGYY01000790
411547
Bacillota
CTG
Gln
>WENV181941160
OGYY01001278
411547
Bacillota
CTG
Gln
>WENV181941237
OGYY01001632
411547
Bacillota
CTG
Gln
>WENV181941653
OGYY01006471
411547
Bacillota
CTG
Gln
>WENV181941118
OGYY01001079
147684
Bacillota
ACG
Arg
>WENV181941659
OGYY01006537
147684
Bacillota
ACG
Arg
>WENV181941138
OGYY01001214
4624
Bacillota
GCT
Ser
>WENV181941363
OGYY01002479
4624
Bacillota
GCT
Ser
>WENV181940864
OGYY01000374
263765
Bacillota
TAC
Val
>WENV181941125
OGYY01001136
263765
Bacillota
TAC
Val
>WENV181941393
OGYY01002701
263765
Bacillota
TAC
Val
>WENV181942129
OGYY01043722
412387
Bacillota
GCA
Cys
>WENV181940597
OGYY01000026
18852
Bacillota
GCT
Ser
>WENV181941131
OGYY01001185
18852
Bacillota
GCT
Ser
>WENV181942217
OGYY01075701
126732
Bacillota
GGG
Pro
>WENV181941270
OGYY01001915
235095
Bacillota
GGT
Thr
>WENV181941273
OGYY01001915
235095
Bacillota
GGT
Thr
>WENV181941350
OGYY01002443
235095
Bacillota
GGT
Thr
>WENV181941521
OGYY01004176
154748
Bacillota
GTC
Asp
>WENV181941498
OGYY01003940
419639
Bacillota
GCA
Cys
>WENV181941388
OGYY01002686
411549
Bacillota
TTG
Gln
>WENV181940967
OGYY01000615
235142
Bacillota
CTT
Lys
>WENV181941256
OGYY01001851
148188
Bacillota
CCG
Arg
>WENV181942025
OGYY01026986
80612
Bacillota
GTA
Tyr
>WENV181940535
OGYY01000003
235127
Bacillota
TTT
Lys
>WENV181941484
OGYY01003809
249522
Bacillota
TAC
Val
>WENV181941697
OGYY01007438
241432
Bacillota
TGT
Thr
>WENV181942152
OGYY01049372
241432
Bacillota
TGT
Thr
>WENV181941510
OGYY01004039
235124
Bacillota
TGG
Pro
>WENV181941836
OGYY01010986
235124
Bacillota
TGG
Pro
>WENV181941347
OGYY01002424
338129
Bacillota
TGT
Thr
>WENV181941559
OGYY01004659
144583
Bacillota
ACG
Arg
>WENV181941282
OGYY01001990
419877
Bacillota
TCC
Gly
>WENV181941271
OGYY01001915
235171
Bacillota
CCA
Trp
>WENV181941348
OGYY01002443
235171
Bacillota
CCA
Trp
>WENV181941281
OGYY01001990
238974
Bacillota
GAA
Phe
>WENV181941344
OGYY01002419
144621
Bacillota
GTT
Asn
>WENV181941381
OGYY01002653
144621
Bacillota
GTT
Asn
>WENV181940714
OGYY01000157
235113
Bacillota
GAA
Phe
>WENV181941845
OGYY01011143
243098
Bacillota
GGT
Thr
>WENV181941436
OGYY01003111
58712
Bacillota
CAG
Leu
>WENV181940839
OGYY01000340
245296
Bacillota
CCC
Gly
>WENV181941497
OGYY01003940
344240
Bacillota
GCC
Gly
>WENV181941074
OGYY01000924
157635
Bacillota
TCT
Arg
>WENV181941183
OGYY01001380
144594
Bacillota
CAC
Val
>WENV181941661
OGYY01006634
144594
Bacillota
CAC
Val
>WENV181941544
OGYY01004461
420471
Bacillota
TCC
Gly
>WENV181940840
OGYY01000341
95563
Bacillota
GTA
Tyr
>WENV181941329
OGYY01002346
272488
Bacillota
GAA
Phe
>WENV181941417
OGYY01002899
272488
Bacillota
GAA
Phe
>WENV181941688
OGYY01007131
114075
Bacillota
TAG
Leu
>WENV181941543
OGYY01004440
119513
Bacillota
CAA
Leu
>WENV181940886
OGYY01000430
238945
Bacillota
GCC
Gly
>WENV181941208
OGYY01001481
238945
Bacillota
GCC
Gly
>WENV181941426
OGYY01002962
238945
Bacillota
GCC
Gly
>WENV181941515
OGYY01004150
238945
Bacillota
GCC
Gly
>WENV181941849
OGYY01011470
238945
Bacillota
GCC
Gly
>WENV181941150
OGYY01001246
249259
Bacillota
GCC
Gly
>WENV181940820
OGYY01000328
338128
Bacillota
TTC
Glu
>WENV181941334
OGYY01002363
338128
Bacillota
TTC
Glu
>WENV181941374
OGYY01002568
338128
Bacillota
TTC
Glu
>WENV181941496
OGYY01003940
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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