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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182096947
OHHO01001285
196621
Bacillota
GTC
Asp
>WENV182097176
OHHO01008409
309417
Bacillota
GGC
Ala
>WENV182097103
OHHO01004762
144612
Bacillota
TCT
Arg
>WENV182097024
OHHO01002712
235098
Bacillota
GAC
Val
>WENV182097237
OHHO01011782
235098
Bacillota
GAC
Val
>WENV182097207
OHHO01010247
148239
Bacillota
TCT
Arg
>WENV182096951
OHHO01001352
44854
Bacillota
TGA
Ser
>WENV182096924
OHHO01001052
307003
Bacillota
TGC
Ala
>WENV182097064
OHHO01003688
59312
Bacillota
CAG
Leu
>WENV182097157
OHHO01007365
235137
Bacillota
TGC
Ala
>WENV182097307
OHHO01019823
59655
Bacillota
CAG
Leu
>WENV182097127
OHHO01006017
88657
Bacillota
GTA
Tyr
>WENV182096828
OHHO01000281
11034
Bacillota
GGA
Ser
>WENV182096993
OHHO01002101
274189
Bacillota
TGT
Thr
>WENV182096741
OHHO01000032
235079
Bacillota
GAA
Phe
>WENV182097135
OHHO01006178
173314
Bacillota
GAT
Ile
>WENV182097320
OHHO01021601
316443
Bacillota
GTC
Asp
>WENV182097030
OHHO01002979
338149
Bacillota
CTC
Glu
>WENV182097151
OHHO01006975
245298
Bacillota
CGG
Pro
>WENV182097000
OHHO01002215
287000
Bacillota
GTT
Asn
>WENV182097230
OHHO01011114
149024
Bacillota
GGT
Thr
>WENV182096739
OHHO01000032
235078
Bacillota
TAC
Val
>WENV182097330
OHHO01022527
153911
Bacillota
GAT
Ile
>WENV182096964
OHHO01001543
100326
Bacillota
GTA
Tyr
>WENV182097208
OHHO01010247
144610
Bacillota
GTG
His
>WENV182097440
OHHO01043847
240017
Bacillota
GCC
Gly
>WENV182097150
OHHO01006975
411547
Bacillota
CTG
Gln
>WENV182096952
OHHO01001352
4624
Bacillota
GCT
Ser
>WENV182097105
OHHO01004821
263765
Bacillota
TAC
Val
>WENV182097389
OHHO01033087
313104
Bacillota
TAC
Val
>WENV182097322
OHHO01021601
109476
Bacillota
TAG
Leu
>WENV182097159
OHHO01007463
239812
Bacillota
CCT
Arg
>WENV182096948
OHHO01001285
235095
Bacillota
GGT
Thr
>WENV182096842
OHHO01000351
411549
Bacillota
TTG
Gln
>WENV182096945
OHHO01001277
148188
Bacillota
CCG
Arg
>WENV182097304
OHHO01019537
80612
Bacillota
GTA
Tyr
>WENV182097218
OHHO01010863
256380
Bacillota
>WENV182096812
OHHO01000226
298620
Bacillota
CAT
Met
>WENV182097102
OHHO01004708
235124
Bacillota
TGG
Pro
>WENV182096827
OHHO01000272
338129
Bacillota
TGT
Thr
>WENV182097254
OHHO01013176
292519
Bacillota
CAT
Met
>WENV182097415
OHHO01040192
144583
Bacillota
ACG
Arg
>WENV182097376
OHHO01030677
247734
Bacillota
TGC
Ala
>WENV182096916
OHHO01000989
144621
Bacillota
GTT
Asn
>WENV182097031
OHHO01002979
144621
Bacillota
GTT
Asn
>WENV182097056
OHHO01003449
243098
Bacillota
GGT
Thr
>WENV182096793
OHHO01000149
58712
Bacillota
CAG
Leu
>WENV182096892
OHHO01000774
58712
Bacillota
CAG
Leu
>WENV182096935
OHHO01001137
245296
Bacillota
CCC
Gly
>WENV182097410
OHHO01038968
198135
Bacillota
GAT
Ile
>WENV182096843
OHHO01000355
196632
Bacillota
GTC
Asp
>WENV182097134
OHHO01006178
299139
Bacillota
TGC
Ala
>WENV182097029
OHHO01002922
144594
Bacillota
CAC
Val
>WENV182097351
OHHO01025287
338127
Bacillota
TTG
Gln
>WENV182097217
OHHO01010759
338128
Bacillota
TTC
Glu
>WENV182096844
OHHO01000355
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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