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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182503424
OIUO01005887
237957
Bacillota
GTT
Asn
>WENV182503210
OIUO01000150
309417
Bacillota
GGC
Ala
>WENV182503535
OIUO01018659
158247
Bacillota
>WENV182503176
OIUO01000056
144612
Bacillota
TCT
Arg
>WENV182503193
OIUO01000087
235098
Bacillota
GAC
Val
>WENV182503380
OIUO01004156
235098
Bacillota
GAC
Val
>WENV182503227
OIUO01000303
44854
Bacillota
TGA
Ser
>WENV182503428
OIUO01005887
238489
Bacillota
GTC
Asp
>WENV182503414
OIUO01005252
144577
Bacillota
GAT
Ile
>WENV182503145
OIUO01000001
304022
Bacillota
GCC
Gly
>WENV182503250
OIUO01000575
304022
Bacillota
GCC
Gly
>WENV182503427
OIUO01005887
302150
Bacillota
TAC
Val
>WENV182503522
OIUO01015870
149310
Bacillota
TCT
Arg
>WENV182503323
OIUO01001882
302152
Bacillota
CTT
Lys
>WENV182503562
OIUO01028301
429429
Bacillota
CCA
Trp
>WENV182503440
OIUO01006562
41154
Bacillota
TAA
Leu
>WENV182503166
OIUO01000041
11034
Bacillota
GGA
Ser
>WENV182503144
OIUO01000001
235079
Bacillota
GAA
Phe
>WENV182503381
OIUO01004170
96360
Bacillota
GTA
Tyr
>WENV182503425
OIUO01005887
7070
Bacillota
GGA
Ser
>WENV182503413
OIUO01005252
235087
Bacillota
TGC
Ala
>WENV182503252
OIUO01000575
316443
Bacillota
GTC
Asp
>WENV182503189
OIUO01000085
338149
Bacillota
CTC
Glu
>WENV182503170
OIUO01000047
245298
Bacillota
CGG
Pro
>WENV182503426
OIUO01005887
390525
Bacillota
TTC
Glu
>WENV182503146
OIUO01000006
411547
Bacillota
CTG
Gln
>WENV182503169
OIUO01000047
411547
Bacillota
CTG
Gln
>WENV182503228
OIUO01000303
4624
Bacillota
GCT
Ser
>WENV182503391
OIUO01004408
263765
Bacillota
TAC
Val
>WENV182503254
OIUO01000575
109476
Bacillota
TAG
Leu
>WENV182503167
OIUO01000043
235095
Bacillota
GGT
Thr
>WENV182503191
OIUO01000086
411549
Bacillota
TTG
Gln
>WENV182503580
OIUO01033524
235142
Bacillota
CTT
Lys
>WENV182503519
OIUO01014323
339391
Bacillota
TTC
Glu
>WENV182503429
OIUO01005887
237956
Bacillota
GAA
Phe
>WENV182503430
OIUO01005887
85288
Bacillota
GTA
Tyr
>WENV182503432
OIUO01005887
240193
Bacillota
GTG
His
>WENV182503181
OIUO01000072
148188
Bacillota
CCG
Arg
>WENV182503180
OIUO01000070
80612
Bacillota
GTA
Tyr
>WENV182503433
OIUO01005887
355179
Bacillota
TTG
Gln
>WENV182503155
OIUO01000023
235124
Bacillota
TGG
Pro
>WENV182503262
OIUO01000681
338129
Bacillota
TGT
Thr
>WENV182503550
OIUO01024382
157838
Bacillota
GTC
Asp
>WENV182503267
OIUO01000747
144583
Bacillota
ACG
Arg
>WENV182503179
OIUO01000066
144621
Bacillota
GTT
Asn
>WENV182503190
OIUO01000085
144621
Bacillota
GTT
Asn
>WENV182503168
OIUO01000046
245296
Bacillota
CCC
Gly
>WENV182503499
OIUO01012266
198135
Bacillota
GAT
Ile
>WENV182503161
OIUO01000027
144594
Bacillota
CAC
Val
>WENV182503378
OIUO01004085
338127
Bacillota
TTG
Gln
>WENV182503431
OIUO01005887
412118
Bacillota
>WENV182503435
OIUO01005887
45160
Bacillota
CAA
Leu
>WENV182503188
OIUO01000084
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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