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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182538774
OIXV01000216
235146
Actinomycetota
CGT
Thr
>WENV182539226
OIXV01002306
235347
Actinomycetota
GGC
Ala
>WENV182538642
OIXV01000057
166493
Actinomycetota
CTT
Lys
>WENV182539868
OIXV01023947
235153
Actinomycetota
CCT
Arg
>WENV182538671
OIXV01000089
144589
Actinomycetota
ACG
Arg
>WENV182539446
OIXV01005372
235194
Actinomycetota
GTG
His
>WENV182538772
OIXV01000216
273786
Actinomycetota
CGT
Thr
>WENV182539065
OIXV01001240
158720
Actinomycetota
ACG
Arg
>WENV182539738
OIXV01014741
10569
Actinomycetota
GCT
Ser
>WENV182539597
OIXV01008121
245301
Actinomycetota
GCC
Gly
>WENV182538685
OIXV01000100
411601
Actinomycetota
CCC
Gly
>WENV182538715
OIXV01000128
144826
Actinomycetota
GGG
Pro
>WENV182538821
OIXV01000295
23370
Actinomycetota
GCT
Ser
>WENV182538553
OIXV01000016
338239
Actinomycetota
TTC
Glu
>WENV182538527
OIXV01000005
162208
Actinomycetota
TAC
Val
>WENV182538826
OIXV01000305
16219
Actinomycetota
GCT
Ser
>WENV182538676
OIXV01000093
235174
Actinomycetota
TGC
Ala
>WENV182538762
OIXV01000181
121510
Actinomycetota
TAA
Leu
>WENV182538512
OIXV01000001
235848
Actinomycetota
TTT
Lys
>WENV182539261
OIXV01002803
145423
Actinomycetota
TCT
Arg
>WENV182539508
OIXV01006215
153948
Actinomycetota
GGG
Pro
>WENV182538837
OIXV01000323
44855
Actinomycetota
TGA
Ser
>WENV182538782
OIXV01000228
235199
Actinomycetota
CAC
Val
>WENV182538836
OIXV01000323
44862
Actinomycetota
CGA
Ser
>WENV182538650
OIXV01000070
45154
Actinomycetota
TGA
Ser
>WENV182538787
OIXV01000238
254857
Actinomycetota
CCG
Arg
>WENV182539198
OIXV01002085
254857
Actinomycetota
CCG
Arg
>WENV182538820
OIXV01000295
144700
Actinomycetota
CAT
Met
>WENV182539276
OIXV01003017
144636
Actinomycetota
GAT
Ile
>WENV182538859
OIXV01000385
243671
Actinomycetota
CTC
Glu
>WENV182538824
OIXV01000305
98279
Actinomycetota
GTA
Tyr
>WENV182538507
OIXV01000001
338148
Actinomycetota
CTG
Gln
>WENV182538647
OIXV01000061
235148
Actinomycetota
GTT
Asn
>WENV182538848
OIXV01000351
144825
Actinomycetota
CAT
Met
>WENV182539837
OIXV01020192
338139
Actinomycetota
GTT
Asn
>WENV182539084
OIXV01001370
235348
Actinomycetota
CCT
Arg
>WENV182538505
OIXV01000001
411554
Actinomycetota
CCC
Gly
>WENV182538511
OIXV01000001
113601
Actinomycetota
TAG
Leu
>WENV182538773
OIXV01000216
113601
Actinomycetota
TAG
Leu
>WENV182539158
OIXV01001738
144595
Actinomycetota
CAA
Leu
>WENV182538712
OIXV01000124
145343
Actinomycetota
GGG
Pro
>WENV182538528
OIXV01000005
235149
Actinomycetota
CCT
Arg
>WENV182538519
OIXV01000004
240009
Actinomycetota
GGC
Ala
>WENV182540032
OIXV01055725
293092
Actinomycetota
CTC
Glu
>WENV182539466
OIXV01005757
414234
Actinomycetota
CTG
Gln
>WENV182539157
OIXV01001738
163764
Actinomycetota
TGG
Pro
>WENV182540018
OIXV01051506
246365
Actinomycetota
ACG
Arg
>WENV182538610
OIXV01000040
145269
Actinomycetota
CAT
Met
>WENV182538595
OIXV01000031
147225
Actinomycetota
CAA
Leu
>WENV182538510
OIXV01000001
235121
Actinomycetota
CGT
Thr
>WENV182538705
OIXV01000114
144635
Actinomycetota
TGG
Pro
>WENV182538731
OIXV01000137
61501
Actinomycetota
CAG
Leu
>WENV182538741
OIXV01000146
429234
Actinomycetota
CTG
Gln
>WENV182538862
OIXV01000390
429234
Actinomycetota
CTG
Gln
>WENV182539964
OIXV01037626
236216
Actinomycetota
GGC
Ala
>WENV182538513
OIXV01000001
80622
Actinomycetota
CAG
Leu
>WENV182538684
OIXV01000100
80622
Actinomycetota
CAG
Leu
>WENV182538638
OIXV01000056
7409
Actinomycetota
CGA
Ser
>WENV182538860
OIXV01000385
356597
Actinomycetota
CTG
Gln
>WENV182538552
OIXV01000016
16222
Actinomycetota
GAG
Leu
>WENV182539889
OIXV01027209
158513
Actinomycetota
TGG
Pro
>WENV182538584
OIXV01000024
412834
Actinomycetota
GCA
Cys
>WENV182539046
OIXV01001107
235173
Actinomycetota
GGC
Ala
>WENV182538713
OIXV01000124
243162
Actinomycetota
GTT
Asn
>WENV182538900
OIXV01000563
243162
Actinomycetota
GTT
Asn
>WENV182538615
OIXV01000047
237831
Actinomycetota
GCC
Gly
>WENV182538893
OIXV01000521
278447
Actinomycetota
GTG
His
>WENV182538819
OIXV01000295
95593
Actinomycetota
>WENV182538853
OIXV01000366
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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