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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182555448
OJDA01000930
235887
Gammaproteobacteria
GTG
His
>WENV182555317
OJDA01000012
279385
Gammaproteobacteria
TTT
Lys
>WENV182555490
OJDA01005573
238499
Gammaproteobacteria
TAC
Val
>WENV182555483
OJDA01004604
145368
Gammaproteobacteria
CCT
Arg
>WENV182555496
OJDA01008084
58822
Gammaproteobacteria
CAA
Leu
>WENV182555312
OJDA01000007
235452
Gammaproteobacteria
GAA
Phe
>WENV182555424
OJDA01000348
240619
Gammaproteobacteria
TGT
Thr
>WENV182555489
OJDA01005234
145366
Gammaproteobacteria
ACG
Arg
>WENV182555327
OJDA01000022
174801
Gammaproteobacteria
TGG
Pro
>WENV182555402
OJDA01000168
45345
Gammaproteobacteria
GGA
Ser
>WENV182555374
OJDA01000105
145485
Gammaproteobacteria
ACG
Arg
>WENV182555482
OJDA01004584
95983
Gammaproteobacteria
>WENV182555343
OJDA01000039
319098
Gammaproteobacteria
TAC
Val
>WENV182555364
OJDA01000080
148452
Gammaproteobacteria
CCT
Arg
>WENV182555309
OJDA01000006
241136
Gammaproteobacteria
TTG
Gln
>WENV182555494
OJDA01007098
235886
Gammaproteobacteria
TTC
Glu
>WENV182555360
OJDA01000069
243921
Gammaproteobacteria
TTT
Lys
>WENV182555480
OJDA01004544
243921
Gammaproteobacteria
TTT
Lys
>WENV182555421
OJDA01000321
247088
Gammaproteobacteria
CCA
Trp
>WENV182555324
OJDA01000020
418713
Gammaproteobacteria
TCC
Gly
>WENV182555404
OJDA01000174
411735
Gammaproteobacteria
GCA
Cys
>WENV182555418
OJDA01000267
175964
Gammaproteobacteria
CAT
Met
>WENV182555446
OJDA01000930
198797
Gammaproteobacteria
TGG
Pro
>WENV182555311
OJDA01000007
59485
Gammaproteobacteria
CAG
Leu
>WENV182555468
OJDA01002463
150183
Gammaproteobacteria
CCG
Arg
>WENV182555427
OJDA01000348
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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