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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182581254
OJGX01001537
165001
Bacteroidota
GTT
Asn
>WENV182581611
OJGX01020108
306609
Bacteroidota
GAA
Phe
>WENV182581660
OJGX01031598
126691
Bacteroidota
TGG
Pro
>WENV182581187
OJGX01000594
99288
Bacteroidota
TAG
Leu
>WENV182581621
OJGX01022587
180185
Bacteroidota
TGC
Ala
>WENV182581592
OJGX01016558
60261
Bacteroidota
TAA
Leu
>WENV182581548
OJGX01012466
103881
Bacteroidota
TAG
Leu
>WENV182581212
OJGX01000887
147106
Bacteroidota
CAT
Met
>WENV182581390
OJGX01004419
127458
Bacteroidota
GAC
Val
>WENV182581474
OJGX01008445
127458
Bacteroidota
GAC
Val
>WENV182581659
OJGX01031598
60611
Bacteroidota
GCT
Ser
>WENV182581623
OJGX01022696
161616
Bacteroidota
CAT
Met
>WENV182581527
OJGX01011654
241347
Bacteroidota
TTG
Gln
>WENV182581695
OJGX01044245
301737
Bacteroidota
TCC
Gly
>WENV182581578
OJGX01014867
349438
Bacteroidota
GGT
Thr
>WENV182581312
OJGX01002731
338568
Bacteroidota
TTC
Glu
>WENV182581186
OJGX01000588
273242
Bacteroidota
CCA
Trp
>WENV182581223
OJGX01001125
273242
Bacteroidota
CCA
Trp
>WENV182581395
OJGX01004664
45519
Bacteroidota
GGA
Ser
>WENV182581699
OJGX01045990
60695
Bacteroidota
GCT
Ser
>WENV182581351
OJGX01003616
127414
Bacteroidota
TGG
Pro
>WENV182581565
OJGX01013624
238764
Bacteroidota
>WENV182581577
OJGX01014867
235935
Bacteroidota
TCC
Gly
>WENV182581465
OJGX01008035
17496
Bacteroidota
GGA
Ser
>WENV182581207
OJGX01000826
139565
Bacteroidota
TGG
Pro
>WENV182581502
OJGX01010303
341187
Bacteroidota
TTG
Gln
>WENV182581507
OJGX01010658
341421
Bacteroidota
CCA
Trp
>WENV182581352
OJGX01003616
176463
Bacteroidota
TCT
Arg
>WENV182581175
OJGX01000518
302196
Bacteroidota
TTT
Lys
>WENV182581497
OJGX01009777
145555
Bacteroidota
GTC
Asp
>WENV182581208
OJGX01000826
145507
Bacteroidota
TCT
Arg
>WENV182581236
OJGX01001230
48382
Bacteroidota
TGA
Ser
>WENV182581591
OJGX01016558
342807
Bacteroidota
GCC
Gly
>WENV182581509
OJGX01010851
179613
Bacteroidota
CAT
Met
>WENV182581576
OJGX01014867
101289
Bacteroidota
GTA
Tyr
>WENV182581402
OJGX01005131
127216
Bacteroidota
GGG
Pro
>WENV182581319
OJGX01002849
110457
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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