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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182588652
OJHV01009041
235887
Gammaproteobacteria
GTG
His
>WENV182588622
OJHV01003428
350432
Gammaproteobacteria
GTG
His
>WENV182588623
OJHV01003435
149065
Gammaproteobacteria
CCA
Trp
>WENV182588625
OJHV01003568
145366
Gammaproteobacteria
ACG
Arg
>WENV182588615
OJHV01002451
16284
Gammaproteobacteria
TGA
Ser
>WENV182588599
OJHV01001046
174801
Gammaproteobacteria
TGG
Pro
>WENV182588642
OJHV01007196
52727
Gammaproteobacteria
GGA
Ser
>WENV182588602
OJHV01001472
277901
Gammaproteobacteria
TGT
Thr
>WENV182588626
OJHV01003707
113688
Gammaproteobacteria
GTA
Tyr
>WENV182588606
OJHV01001620
241136
Gammaproteobacteria
TTG
Gln
>WENV182588635
OJHV01004623
250885
Gammaproteobacteria
TGC
Ala
>WENV182588649
OJHV01008733
193276
Gammaproteobacteria
ACG
Arg
>WENV182588650
OJHV01008733
193276
Gammaproteobacteria
ACG
Arg
>WENV182588620
OJHV01003428
146807
Gammaproteobacteria
TCT
Arg
>WENV182588654
OJHV01009114
268904
Gammaproteobacteria
GTG
His
>WENV182588645
OJHV01007425
147117
Gammaproteobacteria
GTC
Asp
>WENV182588653
OJHV01009114
182279
Gammaproteobacteria
TCT
Arg
>WENV182588595
OJHV01000838
198797
Gammaproteobacteria
TGG
Pro
>WENV182588617
OJHV01002859
59485
Gammaproteobacteria
CAG
Leu
>WENV182588609
OJHV01001818
158083
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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