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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182601716
OJJJ01000287
270475
Bacillota
GAA
Phe
>WENV182601918
OJJJ01001559
270475
Bacillota
GAA
Phe
>WENV182601657
OJJJ01000189
243647
Bacillota
TTT
Lys
>WENV182602102
OJJJ01009788
37110
Bacillota
TAA
Leu
>WENV182601798
OJJJ01000601
16842
Bacillota
CGA
Ser
>WENV182602077
OJJJ01008203
283807
Bacillota
TAC
Val
>WENV182601907
OJJJ01001505
339904
Bacillota
GCC
Gly
>WENV182601500
OJJJ01000012
339890
Bacillota
TTG
Gln
>WENV182602009
OJJJ01002850
339890
Bacillota
TTG
Gln
>WENV182601489
OJJJ01000012
338152
Bacillota
TTC
Glu
>WENV182601521
OJJJ01000021
338152
Bacillota
TTC
Glu
>WENV182601668
OJJJ01000195
338152
Bacillota
TTC
Glu
>WENV182601784
OJJJ01000551
338152
Bacillota
TTC
Glu
>WENV182601785
OJJJ01000551
338152
Bacillota
TTC
Glu
>WENV182601969
OJJJ01002251
338152
Bacillota
TTC
Glu
>WENV182602108
OJJJ01011958
338152
Bacillota
TTC
Glu
>WENV182602118
OJJJ01015334
338152
Bacillota
TTC
Glu
>WENV182601704
OJJJ01000279
242961
Bacillota
GGT
Thr
>WENV182602072
OJJJ01007579
23769
Bacillota
TAA
Leu
>WENV182601758
OJJJ01000439
148239
Bacillota
TCT
Arg
>WENV182601914
OJJJ01001559
10912
Bacillota
GGA
Ser
>WENV182601769
OJJJ01000509
106079
Bacillota
TAG
Leu
>WENV182601906
OJJJ01001505
113680
Bacillota
TAG
Leu
>WENV182601992
OJJJ01002572
16285
Bacillota
GCT
Ser
>WENV182601658
OJJJ01000189
391536
Bacillota
TTC
Glu
>WENV182601662
OJJJ01000189
391536
Bacillota
TTC
Glu
>WENV182601905
OJJJ01001505
235903
Bacillota
TTT
Lys
>WENV182601962
OJJJ01002113
23437
Bacillota
GGA
Ser
>WENV182602131
OJJJ01015637
235114
Bacillota
TTT
Lys
>WENV182601993
OJJJ01002657
106802
Bacillota
GTA
Tyr
>WENV182602004
OJJJ01002813
37083
Bacillota
TGA
Ser
>WENV182601845
OJJJ01000896
388249
Bacillota
GCA
Cys
>WENV182601800
OJJJ01000608
81586
Bacillota
GAG
Leu
>WENV182601985
OJJJ01002510
198770
Bacillota
GTC
Asp
>WENV182601555
OJJJ01000055
16834
Bacillota
GCT
Ser
>WENV182602143
OJJJ01021185
186380
Bacillota
GTC
Asp
>WENV182601759
OJJJ01000443
16778
Bacillota
CGA
Ser
>WENV182601490
OJJJ01000012
277230
Bacillota
TGT
Thr
>WENV182601607
OJJJ01000108
277230
Bacillota
TGT
Thr
>WENV182602109
OJJJ01011958
277230
Bacillota
TGT
Thr
>WENV182601499
OJJJ01000012
156937
Bacillota
GTG
His
>WENV182601602
OJJJ01000098
114002
Bacillota
CAA
Leu
>WENV182601642
OJJJ01000168
37437
Bacillota
TAA
Leu
>WENV182601773
OJJJ01000509
162028
Bacillota
ACG
Arg
>WENV182601659
OJJJ01000189
243612
Bacillota
TAC
Val
>WENV182601663
OJJJ01000189
243612
Bacillota
TAC
Val
>WENV182601683
OJJJ01000237
155089
Bacillota
CAT
Met
>WENV182601841
OJJJ01000826
155089
Bacillota
CAT
Met
>WENV182601727
OJJJ01000323
147135
Bacillota
ACG
Arg
>WENV182601904
OJJJ01001505
338548
Bacillota
TTG
Gln
>WENV182601844
OJJJ01000896
243345
Bacillota
GAA
Phe
>WENV182602079
OJJJ01008203
147684
Bacillota
ACG
Arg
>WENV182601881
OJJJ01001294
342895
Bacillota
CAT
Met
>WENV182601894
OJJJ01001396
412387
Bacillota
GCA
Cys
>WENV182601944
OJJJ01001830
313164
Bacillota
TTT
Lys
>WENV182601768
OJJJ01000509
297837
Bacillota
TTT
Lys
>WENV182601909
OJJJ01001505
147692
Bacillota
TCG
Arg
>WENV182602058
OJJJ01005580
18852
Bacillota
GCT
Ser
>WENV182602066
OJJJ01006691
367412
Bacillota
GTT
Asn
>WENV182601806
OJJJ01000657
194150
Bacillota
TGG
Pro
>WENV182601983
OJJJ01002510
239832
Bacillota
TGT
Thr
>WENV182601998
OJJJ01002706
239832
Bacillota
TGT
Thr
>WENV182601946
OJJJ01001874
238413
Bacillota
GGT
Thr
>WENV182601613
OJJJ01000116
235197
Bacillota
GTC
Asp
>WENV182601638
OJJJ01000168
235197
Bacillota
GTC
Asp
>WENV182601691
OJJJ01000244
342664
Bacillota
>WENV182601640
OJJJ01000168
368876
Bacillota
GCC
Gly
>WENV182601655
OJJJ01000189
368876
Bacillota
GCC
Gly
>WENV182601660
OJJJ01000189
368876
Bacillota
GCC
Gly
>WENV182601604
OJJJ01000106
96872
Bacillota
>WENV182601901
OJJJ01001505
411739
Bacillota
TCC
Gly
>WENV182601908
OJJJ01001505
411739
Bacillota
TCC
Gly
>WENV182601903
OJJJ01001505
279635
Bacillota
GTG
His
>WENV182602142
OJJJ01021144
113978
Bacillota
GTA
Tyr
>WENV182602135
OJJJ01018125
144672
Bacillota
TCT
Arg
>WENV182601899
OJJJ01001505
145383
Bacillota
TCT
Arg
>WENV182601902
OJJJ01001505
145383
Bacillota
TCT
Arg
>WENV182601796
OJJJ01000585
152491
Bacillota
CAT
Met
>WENV182602141
OJJJ01020406
21693
Bacillota
GCT
Ser
>WENV182601767
OJJJ01000509
297267
Bacillota
TAC
Val
>WENV182601916
OJJJ01001559
297267
Bacillota
TAC
Val
>WENV182601792
OJJJ01000585
273029
Bacillota
TGT
Thr
>WENV182601795
OJJJ01000585
281472
Bacillota
GGT
Thr
>WENV182601808
OJJJ01000657
178024
Bacillota
TCT
Arg
>WENV182601740
OJJJ01000367
413657
Bacillota
CCC
Gly
>WENV182601610
OJJJ01000108
272488
Bacillota
GAA
Phe
>WENV182602020
OJJJ01003299
114075
Bacillota
TAG
Leu
>WENV182601656
OJJJ01000189
287034
Bacillota
GTT
Asn
>WENV182601661
OJJJ01000189
287034
Bacillota
GTT
Asn
>WENV182602021
OJJJ01003304
287034
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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