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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182794728
OJSP01034684
24650
Bacillota
TAA
Leu
>WENV182794659
OJSP01024656
158247
Bacillota
>WENV182794191
OJSP01004823
144612
Bacillota
TCT
Arg
>WENV182794311
OJSP01006891
144612
Bacillota
TCT
Arg
>WENV182794407
OJSP01010097
144612
Bacillota
TCT
Arg
>WENV182793196
OJSP01000040
154063
Bacillota
CGG
Pro
>WENV182794442
OJSP01011729
154063
Bacillota
CGG
Pro
>WENV182793724
OJSP01001181
235693
Bacillota
GGT
Thr
>WENV182794712
OJSP01031659
156189
Bacillota
GAT
Ile
>WENV182793745
OJSP01001262
235098
Bacillota
GAC
Val
>WENV182794221
OJSP01005294
235098
Bacillota
GAC
Val
>WENV182794593
OJSP01018539
235098
Bacillota
GAC
Val
>WENV182794301
OJSP01006764
338152
Bacillota
TTC
Glu
>WENV182794491
OJSP01013494
340263
Bacillota
TTC
Glu
>WENV182793786
OJSP01001431
23769
Bacillota
TAA
Leu
>WENV182794908
OJSP01078118
338544
Bacillota
TGT
Thr
>WENV182794098
OJSP01003609
44854
Bacillota
TGA
Ser
>WENV182794353
OJSP01007720
44854
Bacillota
TGA
Ser
>WENV182794494
OJSP01013583
235154
Bacillota
GTT
Asn
>WENV182794395
OJSP01009380
241441
Bacillota
GCC
Gly
>WENV182793630
OJSP01000824
37549
Bacillota
TAA
Leu
>WENV182794918
OJSP01082696
16787
Bacillota
TGA
Ser
>WENV182794806
OJSP01047085
148348
Bacillota
GTC
Asp
>WENV182793821
OJSP01001649
37071
Bacillota
TGA
Ser
>WENV182794286
OJSP01006336
354367
Bacillota
TTG
Gln
>WENV182793175
OJSP01000024
59312
Bacillota
CAG
Leu
>WENV182793545
OJSP01000577
59312
Bacillota
CAG
Leu
>WENV182794802
OJSP01045656
239080
Bacillota
CTG
Gln
>WENV182793186
OJSP01000034
338147
Bacillota
CTC
Glu
>WENV182793187
OJSP01000034
338147
Bacillota
CTC
Glu
>WENV182793188
OJSP01000034
338147
Bacillota
CTC
Glu
>WENV182793252
OJSP01000085
338147
Bacillota
CTC
Glu
>WENV182793461
OJSP01000389
338147
Bacillota
CTC
Glu
>WENV182794849
OJSP01058474
235150
Bacillota
TGC
Ala
>WENV182793582
OJSP01000681
152047
Bacillota
GGG
Pro
>WENV182793269
OJSP01000104
155273
Bacillota
CAT
Met
>WENV182793717
OJSP01001178
16820
Bacillota
GCT
Ser
>WENV182794142
OJSP01004021
152512
Bacillota
CCT
Arg
>WENV182793930
OJSP01002245
152459
Bacillota
GTC
Asp
>WENV182794862
OJSP01063140
338143
Bacillota
CTC
Glu
>WENV182793291
OJSP01000123
235114
Bacillota
TTT
Lys
>WENV182794777
OJSP01042415
341763
Bacillota
CTC
Glu
>WENV182794274
OJSP01006003
235091
Bacillota
CTT
Lys
>WENV182793173
OJSP01000024
44859
Bacillota
AAG
Leu
>WENV182793174
OJSP01000024
44859
Bacillota
AAG
Leu
>WENV182794012
OJSP01002948
11034
Bacillota
GGA
Ser
>WENV182794347
OJSP01007628
11034
Bacillota
GGA
Ser
>WENV182794807
OJSP01047085
239076
Bacillota
GAA
Phe
>WENV182794799
OJSP01045210
247057
Bacillota
TGC
Ala
>WENV182794789
OJSP01044121
10943
Bacillota
GGA
Ser
>WENV182794284
OJSP01006333
235697
Bacillota
GTT
Asn
>WENV182793719
OJSP01001178
342736
Bacillota
TTG
Gln
>WENV182793769
OJSP01001350
235079
Bacillota
GAA
Phe
>WENV182793628
OJSP01000824
340265
Bacillota
GCC
Gly
>WENV182794478
OJSP01013056
340265
Bacillota
GCC
Gly
>WENV182794643
OJSP01023117
340265
Bacillota
GCC
Gly
>WENV182794373
OJSP01008431
338149
Bacillota
CTC
Glu
>WENV182794456
OJSP01012387
338149
Bacillota
CTC
Glu
>WENV182794216
OJSP01005252
245298
Bacillota
CGG
Pro
>WENV182794105
OJSP01003634
37269
Bacillota
TGA
Ser
>WENV182794810
OJSP01048170
340131
Bacillota
GTT
Asn
>WENV182794298
OJSP01006711
37551
Bacillota
CGA
Ser
>WENV182793932
OJSP01002245
81644
Bacillota
GAG
Leu
>WENV182793326
OJSP01000162
413152
Bacillota
TCC
Gly
>WENV182794473
OJSP01012862
162445
Bacillota
CAT
Met
>WENV182794705
OJSP01030465
152492
Bacillota
GGG
Pro
>WENV182794744
OJSP01036479
153911
Bacillota
GAT
Ile
>WENV182794852
OJSP01059411
153911
Bacillota
GAT
Ile
>WENV182794788
OJSP01044121
148268
Bacillota
CGG
Pro
>WENV182793263
OJSP01000097
100326
Bacillota
GTA
Tyr
>WENV182794533
OJSP01015597
144610
Bacillota
GTG
His
>WENV182793887
OJSP01001967
411547
Bacillota
CTG
Gln
>WENV182794215
OJSP01005252
411547
Bacillota
CTG
Gln
>WENV182794321
OJSP01007183
411547
Bacillota
CTG
Gln
>WENV182793924
OJSP01002196
147684
Bacillota
ACG
Arg
>WENV182794099
OJSP01003609
4624
Bacillota
GCT
Ser
>WENV182794354
OJSP01007720
4624
Bacillota
GCT
Ser
>WENV182794369
OJSP01008331
412387
Bacillota
GCA
Cys
>WENV182794008
OJSP01002895
235095
Bacillota
GGT
Thr
>WENV182794082
OJSP01003447
235095
Bacillota
GGT
Thr
>WENV182794083
OJSP01003447
235095
Bacillota
GGT
Thr
>WENV182794441
OJSP01011570
235095
Bacillota
GGT
Thr
>WENV182793101
OJSP01000012
344183
Bacillota
CTG
Gln
>WENV182794492
OJSP01013494
239079
Bacillota
TAC
Val
>WENV182793760
OJSP01001316
411549
Bacillota
TTG
Gln
>WENV182794257
OJSP01005763
411549
Bacillota
TTG
Gln
>WENV182793725
OJSP01001181
152045
Bacillota
CAT
Met
>WENV182793849
OJSP01001789
243398
Bacillota
TTC
Glu
>WENV182793870
OJSP01001868
37588
Bacillota
TGA
Ser
>WENV182794540
OJSP01015868
154711
Bacillota
TGG
Pro
>WENV182793925
OJSP01002202
148188
Bacillota
CCG
Arg
>WENV182794462
OJSP01012490
148188
Bacillota
CCG
Arg
>WENV182794583
OJSP01018172
148188
Bacillota
CCG
Arg
>WENV182794052
OJSP01003259
152046
Bacillota
TCT
Arg
>WENV182794005
OJSP01002886
80612
Bacillota
GTA
Tyr
>WENV182793333
OJSP01000168
256380
Bacillota
>WENV182793738
OJSP01001242
152051
Bacillota
ACG
Arg
>WENV182793706
OJSP01001129
243401
Bacillota
CGT
Thr
>WENV182793652
OJSP01000913
163943
Bacillota
GTC
Asp
>WENV182794202
OJSP01005060
163943
Bacillota
GTC
Asp
>WENV182794907
OJSP01078118
145382
Bacillota
GTC
Asp
>WENV182794525
OJSP01015494
241432
Bacillota
TGT
Thr
>WENV182794812
OJSP01048170
241432
Bacillota
TGT
Thr
>WENV182794834
OJSP01054830
235638
Bacillota
GAA
Phe
>WENV182793888
OJSP01001979
235124
Bacillota
TGG
Pro
>WENV182793958
OJSP01002435
235124
Bacillota
TGG
Pro
>WENV182794612
OJSP01021049
235124
Bacillota
TGG
Pro
>WENV182794871
OJSP01066301
345314
Bacillota
TTG
Gln
>WENV182794287
OJSP01006336
237963
Bacillota
TTT
Lys
>WENV182794381
OJSP01008778
254433
Bacillota
TAC
Val
>WENV182794244
OJSP01005642
338129
Bacillota
TGT
Thr
>WENV182794447
OJSP01011774
157838
Bacillota
GTC
Asp
>WENV182793901
OJSP01002078
144583
Bacillota
ACG
Arg
>WENV182794626
OJSP01021766
247734
Bacillota
TGC
Ala
>WENV182794080
OJSP01003447
235171
Bacillota
CCA
Trp
>WENV182794439
OJSP01011570
235171
Bacillota
CCA
Trp
>WENV182794374
OJSP01008431
144621
Bacillota
GTT
Asn
>WENV182794457
OJSP01012387
144621
Bacillota
GTT
Asn
>WENV182793290
OJSP01000123
235113
Bacillota
GAA
Phe
>WENV182793952
OJSP01002408
58712
Bacillota
CAG
Leu
>WENV182794351
OJSP01007699
58712
Bacillota
CAG
Leu
>WENV182794474
OJSP01012875
157719
Bacillota
CAT
Met
>WENV182793919
OJSP01002147
245296
Bacillota
CCC
Gly
>WENV182794038
OJSP01003154
245296
Bacillota
CCC
Gly
>WENV182794318
OJSP01007085
261708
Bacillota
CCA
Trp
>WENV182794412
OJSP01010288
248965
Bacillota
GCC
Gly
>WENV182794774
OJSP01041635
242686
Bacillota
TGC
Ala
>WENV182794288
OJSP01006357
144594
Bacillota
CAC
Val
>WENV182794329
OJSP01007303
144594
Bacillota
CAC
Val
>WENV182794752
OJSP01037600
119513
Bacillota
CAA
Leu
>WENV182793496
OJSP01000473
238945
Bacillota
GCC
Gly
>WENV182793497
OJSP01000473
238945
Bacillota
GCC
Gly
>WENV182793696
OJSP01001093
238945
Bacillota
GCC
Gly
>WENV182794575
OJSP01017621
238945
Bacillota
GCC
Gly
>WENV182793770
OJSP01001350
249259
Bacillota
GCC
Gly
>WENV182794477
OJSP01013004
238857
Bacillota
CCA
Trp
>WENV182794734
OJSP01035499
338131
Bacillota
GCC
Gly
>WENV182793256
OJSP01000090
338128
Bacillota
TTC
Glu
>WENV182793271
OJSP01000106
338128
Bacillota
TTC
Glu
>WENV182794135
OJSP01003911
338128
Bacillota
TTC
Glu
>WENV182794521
OJSP01015343
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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