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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182815763
OJYU01000008
235146
Actinomycetota
CGT
Thr
>WENV182815800
OJYU01000751
147158
Actinomycetota
TTT
Lys
>WENV182815770
OJYU01000014
235347
Actinomycetota
GGC
Ala
>WENV182815773
OJYU01000016
3239
Actinomycetota
GCT
Ser
>WENV182815746
OJYU01000001
235092
Actinomycetota
CCG
Arg
>WENV182815758
OJYU01000006
235194
Actinomycetota
GTG
His
>WENV182815741
OJYU01000001
411601
Actinomycetota
CCC
Gly
>WENV182815778
OJYU01000020
144826
Actinomycetota
GGG
Pro
>WENV182815751
OJYU01000002
23370
Actinomycetota
GCT
Ser
>WENV182815764
OJYU01000010
147146
Actinomycetota
ACG
Arg
>WENV182815755
OJYU01000002
338239
Actinomycetota
TTC
Glu
>WENV182815748
OJYU01000001
44929
Actinomycetota
GGA
Ser
>WENV182815768
OJYU01000013
235174
Actinomycetota
TGC
Ala
>WENV182815744
OJYU01000001
235101
Actinomycetota
TTT
Lys
>WENV182815759
OJYU01000007
121510
Actinomycetota
TAA
Leu
>WENV182815753
OJYU01000002
44855
Actinomycetota
TGA
Ser
>WENV182815752
OJYU01000002
44862
Actinomycetota
CGA
Ser
>WENV182815769
OJYU01000014
413665
Actinomycetota
TTG
Gln
>WENV182815750
OJYU01000002
144700
Actinomycetota
CAT
Met
>WENV182815742
OJYU01000001
243671
Actinomycetota
CTC
Glu
>WENV182815743
OJYU01000001
338148
Actinomycetota
CTG
Gln
>WENV182815772
OJYU01000015
235148
Actinomycetota
GTT
Asn
>WENV182815774
OJYU01000016
338238
Actinomycetota
CCA
Trp
>WENV182815779
OJYU01000023
144825
Actinomycetota
CAT
Met
>WENV182815776
OJYU01000017
235348
Actinomycetota
CCT
Arg
>WENV182815820
OJYU01002399
80899
Actinomycetota
CAG
Leu
>WENV182815762
OJYU01000008
113601
Actinomycetota
TAG
Leu
>WENV182815760
OJYU01000007
144595
Actinomycetota
CAA
Leu
>WENV182815798
OJYU01000420
237804
Actinomycetota
TGT
Thr
>WENV182815761
OJYU01000008
235121
Actinomycetota
CGT
Thr
>WENV182815803
OJYU01001569
412879
Actinomycetota
TCC
Gly
>WENV182815780
OJYU01000032
17009
Actinomycetota
GAG
Leu
>WENV182815765
OJYU01000011
80622
Actinomycetota
CAG
Leu
>WENV182815754
OJYU01000002
147734
Actinomycetota
GTC
Asp
>WENV182815766
OJYU01000012
243162
Actinomycetota
GTT
Asn
>WENV182815757
OJYU01000004
144660
Actinomycetota
TAC
Val
>WENV182815749
OJYU01000002
95593
Actinomycetota
>WENV182815783
OJYU01000047
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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