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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182842591
OKIF01000114
145143
Actinomycetota
TGG
Pro
>WENV182842623
OKIF01000170
342772
Actinomycetota
CTG
Gln
>WENV182842651
OKIF01000272
342772
Actinomycetota
CTG
Gln
>WENV182842527
OKIF01000007
147158
Actinomycetota
TTT
Lys
>WENV182842505
OKIF01000001
148377
Actinomycetota
CGG
Pro
>WENV182842624
OKIF01000184
148377
Actinomycetota
CGG
Pro
>WENV182842611
OKIF01000128
121519
Actinomycetota
TTG
Gln
>WENV182842525
OKIF01000007
147155
Actinomycetota
GTC
Asp
>WENV182842605
OKIF01000124
237816
Actinomycetota
GGT
Thr
>WENV182842566
OKIF01000043
37209
Actinomycetota
GAG
Leu
>WENV182842609
OKIF01000126
235627
Actinomycetota
CTT
Lys
>WENV182842610
OKIF01000126
235627
Actinomycetota
CTT
Lys
>WENV182842575
OKIF01000066
147157
Actinomycetota
TAC
Val
>WENV182842557
OKIF01000035
80900
Actinomycetota
TGA
Ser
>WENV182842588
OKIF01000110
339641
Actinomycetota
GAC
Val
>WENV182842587
OKIF01000110
411803
Actinomycetota
GCA
Cys
>WENV182842552
OKIF01000026
415620
Actinomycetota
TCC
Gly
>WENV182842583
OKIF01000106
158275
Actinomycetota
GTC
Asp
>WENV182842620
OKIF01000154
158275
Actinomycetota
GTC
Asp
>WENV182842602
OKIF01000122
149271
Actinomycetota
CAT
Met
>WENV182842576
OKIF01000066
339640
Actinomycetota
CTG
Gln
>WENV182842696
OKIF01001192
412384
Actinomycetota
CCC
Gly
>WENV182842582
OKIF01000094
45767
Actinomycetota
GGA
Ser
>WENV182842506
OKIF01000001
152190
Actinomycetota
GAT
Ile
>WENV182842695
OKIF01001115
237815
Actinomycetota
CTT
Lys
>WENV182842628
OKIF01000219
237808
Actinomycetota
TGC
Ala
>WENV182842561
OKIF01000036
80899
Actinomycetota
CAG
Leu
>WENV182842526
OKIF01000007
147156
Actinomycetota
GAA
Phe
>WENV182842616
OKIF01000141
237804
Actinomycetota
TGT
Thr
>WENV182842533
OKIF01000014
240124
Actinomycetota
CGT
Thr
>WENV182842625
OKIF01000185
236216
Actinomycetota
GGC
Ala
>WENV182842530
OKIF01000013
236216
Actinomycetota
GGC
Ala
>WENV182842606
OKIF01000124
338489
Actinomycetota
CAT
Met
>WENV182842532
OKIF01000014
37773
Actinomycetota
CGA
Ser
>WENV182842572
OKIF01000060
237803
Actinomycetota
CGT
Thr
>WENV182842577
OKIF01000066
237812
Actinomycetota
CTC
Glu
>WENV182842560
OKIF01000035
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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