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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182842716
OKIF01001919
37110
Bacillota
TAA
Leu
>WENV182842680
OKIF01000702
235287
Bacillota
TTT
Lys
>WENV182842688
OKIF01000968
16815
Bacillota
TGA
Ser
>WENV182842700
OKIF01001218
338544
Bacillota
TGT
Thr
>WENV182842698
OKIF01001218
95737
Bacillota
GTA
Tyr
>WENV182842701
OKIF01001218
95737
Bacillota
GTA
Tyr
>WENV182842671
OKIF01000433
243346
Bacillota
TGC
Ala
>WENV182842709
OKIF01001253
154766
Bacillota
GTC
Asp
>WENV182842689
OKIF01000968
16285
Bacillota
GCT
Ser
>WENV182842732
OKIF01002528
238989
Bacillota
GAA
Phe
>WENV182842746
OKIF01003862
344203
Bacillota
GCC
Gly
>WENV182842678
OKIF01000702
235697
Bacillota
GTT
Asn
>WENV182842693
OKIF01001082
338550
Bacillota
>WENV182842712
OKIF01001253
338439
Bacillota
GCC
Gly
>WENV182842631
OKIF01000227
342635
Bacillota
TTC
Glu
>WENV182842539
OKIF01000017
81172
Bacillota
>WENV182842634
OKIF01000227
239108
Bacillota
GAA
Phe
>WENV182842748
OKIF01003862
150597
Bacillota
TCT
Arg
>WENV182842747
OKIF01003862
411739
Bacillota
TCC
Gly
>WENV182842751
OKIF01003862
411739
Bacillota
TCC
Gly
>WENV182842633
OKIF01000227
237681
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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