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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182965287
OKWR01058718
151703
Spirochaetota
TTC
Glu
>WENV182964785
OKWR01008316
81573
Spirochaetota
TGA
Ser
>WENV182964689
OKWR01006248
342550
Spirochaetota
TCC
Gly
>WENV182964370
OKWR01001557
151690
Spirochaetota
TCT
Arg
>WENV182965286
OKWR01058718
242710
Spirochaetota
TTT
Lys
>WENV182964678
OKWR01005861
242704
Spirochaetota
GCC
Gly
>WENV182964373
OKWR01001557
236001
Spirochaetota
TAC
Val
>WENV182964369
OKWR01001557
151712
Spirochaetota
TGG
Pro
>WENV182964371
OKWR01001557
151705
Spirochaetota
GTG
His
>WENV182964346
OKWR01001249
242727
Spirochaetota
CCA
Trp
>WENV182964786
OKWR01008316
242697
Spirochaetota
CCT
Arg
>WENV182964357
OKWR01001393
45737
Spirochaetota
TAA
Leu
>WENV182964644
OKWR01005034
242700
Spirochaetota
GTT
Asn
>WENV182964757
OKWR01007833
242716
Spirochaetota
GAA
Phe
>WENV182964546
OKWR01003255
151718
Spirochaetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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