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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183057788
OLHM01004902
146646
Gammaproteobacteria
TGG
Pro
>WENV183057662
OLHM01000309
243823
Gammaproteobacteria
GCC
Gly
>WENV183057660
OLHM01000288
149065
Gammaproteobacteria
CCA
Trp
>WENV183057717
OLHM01001309
149065
Gammaproteobacteria
CCA
Trp
>WENV183057653
OLHM01000193
147048
Gammaproteobacteria
CCA
Trp
>WENV183057703
OLHM01000992
147048
Gammaproteobacteria
CCA
Trp
>WENV183057655
OLHM01000206
149066
Gammaproteobacteria
CAT
Met
>WENV183057696
OLHM01000872
95973
Gammaproteobacteria
CAA
Leu
>WENV183057663
OLHM01000312
95973
Gammaproteobacteria
CAA
Leu
>WENV183057807
OLHM01006271
145260
Gammaproteobacteria
CAT
Met
>WENV183057624
OLHM01000010
95866
Gammaproteobacteria
GTA
Tyr
>WENV183057656
OLHM01000241
237709
Gammaproteobacteria
GTG
His
>WENV183057726
OLHM01001533
149036
Gammaproteobacteria
CCA
Trp
>WENV183057922
OLHM01024245
149036
Gammaproteobacteria
CCA
Trp
>WENV183057626
OLHM01000023
24366
Gammaproteobacteria
GGA
Ser
>WENV183057796
OLHM01005444
148148
Gammaproteobacteria
GAC
Val
>WENV183057672
OLHM01000374
146644
Gammaproteobacteria
GGG
Pro
>WENV183057820
OLHM01007002
237221
Gammaproteobacteria
GGC
Ala
>WENV183057647
OLHM01000148
237221
Gammaproteobacteria
GGC
Ala
>WENV183057636
OLHM01000080
99005
Gammaproteobacteria
GAG
Leu
>WENV183057730
OLHM01001587
349693
Gammaproteobacteria
TTG
Gln
>WENV183057732
OLHM01001587
349693
Gammaproteobacteria
TTG
Gln
>WENV183057811
OLHM01006375
412799
Gammaproteobacteria
GCA
Cys
>WENV183057915
OLHM01022822
340801
Gammaproteobacteria
CCT
Arg
>WENV183057889
OLHM01017558
241230
Gammaproteobacteria
GAA
Phe
>WENV183057671
OLHM01000368
16394
Gammaproteobacteria
TGA
Ser
>WENV183057623
OLHM01000009
339596
Gammaproteobacteria
CCT
Arg
>WENV183057639
OLHM01000099
339596
Gammaproteobacteria
CCT
Arg
>WENV183057632
OLHM01000069
97105
Gammaproteobacteria
GTA
Tyr
>WENV183057651
OLHM01000162
6972
Gammaproteobacteria
>WENV183057746
OLHM01002576
6972
Gammaproteobacteria
>WENV183057747
OLHM01002576
147052
Gammaproteobacteria
ACG
Arg
>WENV183057748
OLHM01002576
147052
Gammaproteobacteria
ACG
Arg
>WENV183057749
OLHM01002576
147052
Gammaproteobacteria
ACG
Arg
>WENV183057830
OLHM01008150
277901
Gammaproteobacteria
TGT
Thr
>WENV183057641
OLHM01000120
240197
Gammaproteobacteria
GTT
Asn
>WENV183057642
OLHM01000120
240197
Gammaproteobacteria
GTT
Asn
>WENV183057819
OLHM01006959
149038
Gammaproteobacteria
TGG
Pro
>WENV183057645
OLHM01000133
278046
Gammaproteobacteria
TGT
Thr
>WENV183057745
OLHM01002508
278046
Gammaproteobacteria
TGT
Thr
>WENV183057680
OLHM01000520
23644
Gammaproteobacteria
GGA
Ser
>WENV183057637
OLHM01000083
147057
Gammaproteobacteria
GAC
Val
>WENV183057678
OLHM01000459
147057
Gammaproteobacteria
GAC
Val
>WENV183057743
OLHM01002498
237220
Gammaproteobacteria
GTT
Asn
>WENV183057823
OLHM01007454
237220
Gammaproteobacteria
GTT
Asn
>WENV183057729
OLHM01001587
99006
Gammaproteobacteria
TAG
Leu
>WENV183057731
OLHM01001587
99006
Gammaproteobacteria
TAG
Leu
>WENV183057679
OLHM01000471
149315
Gammaproteobacteria
GAC
Val
>WENV183057622
OLHM01000002
147051
Gammaproteobacteria
CAT
Met
>WENV183057657
OLHM01000266
147051
Gammaproteobacteria
CAT
Met
>WENV183057649
OLHM01000159
18218
Gammaproteobacteria
TGA
Ser
>WENV183057650
OLHM01000162
18218
Gammaproteobacteria
TGA
Ser
>WENV183057863
OLHM01013378
341850
Gammaproteobacteria
TTG
Gln
>WENV183057631
OLHM01000069
237712
Gammaproteobacteria
TGT
Thr
>WENV183057666
OLHM01000334
237712
Gammaproteobacteria
TGT
Thr
>WENV183057872
OLHM01013985
151889
Gammaproteobacteria
CAT
Met
>WENV183057718
OLHM01001333
146642
Gammaproteobacteria
CCA
Trp
>WENV183057777
OLHM01004218
146642
Gammaproteobacteria
CCA
Trp
>WENV183057652
OLHM01000190
339597
Gammaproteobacteria
CCG
Arg
>WENV183057674
OLHM01000396
339597
Gammaproteobacteria
CCG
Arg
>WENV183057621
OLHM01000002
262546
Gammaproteobacteria
TGC
Ala
>WENV183057880
OLHM01015735
262546
Gammaproteobacteria
TGC
Ala
>WENV183057625
OLHM01000011
268904
Gammaproteobacteria
GTG
His
>WENV183057787
OLHM01004902
268904
Gammaproteobacteria
GTG
His
>WENV183057857
OLHM01011751
237713
Gammaproteobacteria
TAC
Val
>WENV183057676
OLHM01000441
19282
Gammaproteobacteria
TGA
Ser
>WENV183057809
OLHM01006361
19282
Gammaproteobacteria
TGA
Ser
>WENV183057851
OLHM01010833
149037
Gammaproteobacteria
GAC
Val
>WENV183057681
OLHM01000539
16840
Gammaproteobacteria
GGA
Ser
>WENV183057772
OLHM01003827
45439
Gammaproteobacteria
GGA
Ser
>WENV183057736
OLHM01001890
10850
Gammaproteobacteria
TGA
Ser
>WENV183057682
OLHM01000541
179150
Gammaproteobacteria
CAT
Met
>WENV183057683
OLHM01000541
179150
Gammaproteobacteria
CAT
Met
>WENV183057627
OLHM01000035
237711
Gammaproteobacteria
GAA
Phe
>WENV183057644
OLHM01000133
237711
Gammaproteobacteria
GAA
Phe
>WENV183057665
OLHM01000334
237711
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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