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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183065131
OLII01030359
113700
Alphaproteobacteria
>WENV183064889
OLII01002196
114627
Alphaproteobacteria
>WENV183065163
OLII01039151
338283
Alphaproteobacteria
CAC
Val
>WENV183065172
OLII01042058
256971
Alphaproteobacteria
TGT
Thr
>WENV183065193
OLII01049751
147879
Alphaproteobacteria
TGG
Pro
>WENV183065116
OLII01025982
150172
Alphaproteobacteria
ACG
Arg
>WENV183064860
OLII01001673
340106
Alphaproteobacteria
GCC
Gly
>WENV183065057
OLII01016110
59164
Alphaproteobacteria
GAG
Leu
>WENV183064922
OLII01004053
319925
Alphaproteobacteria
TGT
Thr
>WENV183065205
OLII01056941
154227
Alphaproteobacteria
CAT
Met
>WENV183065189
OLII01048136
154579
Alphaproteobacteria
GTG
His
>WENV183065103
OLII01022003
127020
Alphaproteobacteria
TCT
Arg
>WENV183065008
OLII01009495
294405
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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