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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183067161
OLIL01013058
163526
Gammaproteobacteria
TCT
Arg
>WENV183067280
OLIL01029537
163526
Gammaproteobacteria
TCT
Arg
>WENV183066936
OLIL01002397
417139
Gammaproteobacteria
GCA
Cys
>WENV183067279
OLIL01029537
176122
Gammaproteobacteria
TCG
Arg
>WENV183066871
OLIL01001788
161963
Gammaproteobacteria
GAC
Val
>WENV183066630
OLIL01000344
338240
Gammaproteobacteria
>WENV183066787
OLIL01001179
159154
Gammaproteobacteria
GAC
Val
>WENV183066788
OLIL01001179
159154
Gammaproteobacteria
GAC
Val
>WENV183066807
OLIL01001280
147025
Gammaproteobacteria
CAT
Met
>WENV183066631
OLIL01000344
236050
Gammaproteobacteria
TGT
Thr
>WENV183066641
OLIL01000394
260238
Gammaproteobacteria
>WENV183066642
OLIL01000394
260238
Gammaproteobacteria
>WENV183066643
OLIL01000394
260238
Gammaproteobacteria
>WENV183066838
OLIL01001438
260238
Gammaproteobacteria
>WENV183066839
OLIL01001438
260238
Gammaproteobacteria
>WENV183067115
OLIL01009295
342830
Gammaproteobacteria
>WENV183067116
OLIL01009295
342830
Gammaproteobacteria
>WENV183066920
OLIL01002178
23731
Gammaproteobacteria
GGA
Ser
>WENV183066652
OLIL01000437
346720
Gammaproteobacteria
TCC
Gly
>WENV183066752
OLIL01000889
175661
Gammaproteobacteria
ACG
Arg
>WENV183066753
OLIL01000889
175661
Gammaproteobacteria
ACG
Arg
>WENV183066754
OLIL01000889
175661
Gammaproteobacteria
ACG
Arg
>WENV183066755
OLIL01000889
175661
Gammaproteobacteria
ACG
Arg
>WENV183066651
OLIL01000437
267607
Gammaproteobacteria
TGT
Thr
>WENV183066439
OLIL01000067
147761
Gammaproteobacteria
TGG
Pro
>WENV183066750
OLIL01000878
147761
Gammaproteobacteria
TGG
Pro
>WENV183066993
OLIL01003580
176256
Gammaproteobacteria
GTC
Asp
>WENV183067006
OLIL01003852
176256
Gammaproteobacteria
GTC
Asp
>WENV183067151
OLIL01011961
176256
Gammaproteobacteria
GTC
Asp
>WENV183067152
OLIL01011981
176256
Gammaproteobacteria
GTC
Asp
>WENV183066866
OLIL01001783
179150
Gammaproteobacteria
CAT
Met
>WENV183066867
OLIL01001783
179150
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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