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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183142887
OLOK01003759
24650
Bacillota
TAA
Leu
>WENV183143346
OLOK01026647
155958
Bacillota
GAT
Ile
>WENV183143441
OLOK01040460
158247
Bacillota
>WENV183143095
OLOK01007616
155113
Bacillota
CGG
Pro
>WENV183142880
OLOK01003666
144612
Bacillota
TCT
Arg
>WENV183143491
OLOK01052723
144612
Bacillota
TCT
Arg
>WENV183143494
OLOK01053571
235134
Bacillota
GAA
Phe
>WENV183142538
OLOK01001155
235098
Bacillota
GAC
Val
>WENV183142898
OLOK01003906
235098
Bacillota
GAC
Val
>WENV183143315
OLOK01021155
338152
Bacillota
TTC
Glu
>WENV183142849
OLOK01003510
44854
Bacillota
TGA
Ser
>WENV183143174
OLOK01011199
235154
Bacillota
GTT
Asn
>WENV183142674
OLOK01001897
37071
Bacillota
TGA
Ser
>WENV183143316
OLOK01021155
429443
Bacillota
GCA
Cys
>WENV183142132
OLOK01000063
59312
Bacillota
CAG
Leu
>WENV183142206
OLOK01000161
59312
Bacillota
CAG
Leu
>WENV183142548
OLOK01001180
238910
Bacillota
CTT
Lys
>WENV183142124
OLOK01000053
338147
Bacillota
CTC
Glu
>WENV183142188
OLOK01000134
338147
Bacillota
CTC
Glu
>WENV183142189
OLOK01000134
338147
Bacillota
CTC
Glu
>WENV183142190
OLOK01000134
338147
Bacillota
CTC
Glu
>WENV183142419
OLOK01000679
338147
Bacillota
CTC
Glu
>WENV183142603
OLOK01001482
338147
Bacillota
CTC
Glu
>WENV183143395
OLOK01033976
235150
Bacillota
TGC
Ala
>WENV183143098
OLOK01007670
155273
Bacillota
CAT
Met
>WENV183143482
OLOK01050783
235137
Bacillota
TGC
Ala
>WENV183143003
OLOK01005573
293599
Bacillota
CTT
Lys
>WENV183143404
OLOK01035125
281701
Bacillota
TGC
Ala
>WENV183143507
OLOK01055164
198770
Bacillota
GTC
Asp
>WENV183142728
OLOK01002407
429429
Bacillota
CCA
Trp
>WENV183143038
OLOK01006603
429429
Bacillota
CCA
Trp
>WENV183143041
OLOK01006683
379268
Bacillota
TTC
Glu
>WENV183142775
OLOK01002831
11034
Bacillota
GGA
Ser
>WENV183142498
OLOK01000993
274189
Bacillota
TGT
Thr
>WENV183142744
OLOK01002526
274189
Bacillota
TGT
Thr
>WENV183143178
OLOK01011254
274189
Bacillota
TGT
Thr
>WENV183142341
OLOK01000442
295714
Bacillota
GCC
Gly
>WENV183142583
OLOK01001367
295714
Bacillota
GCC
Gly
>WENV183143298
OLOK01018308
295714
Bacillota
GCC
Gly
>WENV183143227
OLOK01013220
235087
Bacillota
TGC
Ala
>WENV183142812
OLOK01003221
338149
Bacillota
CTC
Glu
>WENV183142952
OLOK01004683
245298
Bacillota
CGG
Pro
>WENV183142090
OLOK01000009
95581
Bacillota
CAG
Leu
>WENV183143102
OLOK01007812
287000
Bacillota
GTT
Asn
>WENV183142665
OLOK01001872
413152
Bacillota
TCC
Gly
>WENV183142776
OLOK01002833
152492
Bacillota
GGG
Pro
>WENV183143071
OLOK01007161
152492
Bacillota
GGG
Pro
>WENV183142161
OLOK01000099
338676
Bacillota
CCG
Arg
>WENV183142102
OLOK01000027
100326
Bacillota
GTA
Tyr
>WENV183142795
OLOK01002990
144610
Bacillota
GTG
His
>WENV183142460
OLOK01000851
411547
Bacillota
CTG
Gln
>WENV183142951
OLOK01004683
411547
Bacillota
CTG
Gln
>WENV183142168
OLOK01000106
147684
Bacillota
ACG
Arg
>WENV183142556
OLOK01001247
147684
Bacillota
ACG
Arg
>WENV183142938
OLOK01004427
147684
Bacillota
ACG
Arg
>WENV183143115
OLOK01008227
147684
Bacillota
ACG
Arg
>WENV183142850
OLOK01003510
4624
Bacillota
GCT
Ser
>WENV183142115
OLOK01000042
263765
Bacillota
TAC
Val
>WENV183142673
OLOK01001896
412387
Bacillota
GCA
Cys
>WENV183143327
OLOK01023676
412387
Bacillota
GCA
Cys
>WENV183142156
OLOK01000096
190275
Bacillota
TCT
Arg
>WENV183143505
OLOK01055164
239832
Bacillota
TGT
Thr
>WENV183142544
OLOK01001171
411549
Bacillota
TTG
Gln
>WENV183142457
OLOK01000836
235142
Bacillota
CTT
Lys
>WENV183142720
OLOK01002267
235142
Bacillota
CTT
Lys
>WENV183143401
OLOK01034883
59296
Bacillota
AAG
Leu
>WENV183143470
OLOK01048076
338410
Bacillota
TTC
Glu
>WENV183142743
OLOK01002525
148188
Bacillota
CCG
Arg
>WENV183142889
OLOK01003813
148188
Bacillota
CCG
Arg
>WENV183143203
OLOK01012134
298639
Bacillota
GTT
Asn
>WENV183142751
OLOK01002614
80612
Bacillota
GTA
Tyr
>WENV183142604
OLOK01001515
256380
Bacillota
>WENV183142348
OLOK01000462
235127
Bacillota
TTT
Lys
>WENV183143127
OLOK01008646
298620
Bacillota
CAT
Met
>WENV183143512
OLOK01055835
235638
Bacillota
GAA
Phe
>WENV183142727
OLOK01002404
235124
Bacillota
TGG
Pro
>WENV183142785
OLOK01002945
254433
Bacillota
TAC
Val
>WENV183142883
OLOK01003727
338129
Bacillota
TGT
Thr
>WENV183143369
OLOK01029132
144583
Bacillota
ACG
Arg
>WENV183142524
OLOK01001089
144652
Bacillota
GTC
Asp
>WENV183142312
OLOK01000366
419877
Bacillota
TCC
Gly
>WENV183143128
OLOK01008655
235171
Bacillota
CCA
Trp
>WENV183142934
OLOK01004361
238974
Bacillota
GAA
Phe
>WENV183142813
OLOK01003221
144621
Bacillota
GTT
Asn
>WENV183142454
OLOK01000805
235113
Bacillota
GAA
Phe
>WENV183142882
OLOK01003666
58712
Bacillota
CAG
Leu
>WENV183143156
OLOK01010108
245296
Bacillota
CCC
Gly
>WENV183143052
OLOK01006825
272992
Bacillota
CTT
Lys
>WENV183143472
OLOK01048590
198135
Bacillota
GAT
Ile
>WENV183142112
OLOK01000041
248965
Bacillota
GCC
Gly
>WENV183143206
OLOK01012162
299139
Bacillota
TGC
Ala
>WENV183143471
OLOK01048590
299139
Bacillota
TGC
Ala
>WENV183142900
OLOK01003931
144594
Bacillota
CAC
Val
>WENV183142128
OLOK01000058
95563
Bacillota
GTA
Tyr
>WENV183142570
OLOK01001307
114075
Bacillota
TAG
Leu
>WENV183142646
OLOK01001754
114075
Bacillota
TAG
Leu
>WENV183142299
OLOK01000355
119513
Bacillota
CAA
Leu
>WENV183143485
OLOK01051630
292012
Bacillota
TGC
Ala
>WENV183143545
OLOK01065799
263523
Bacillota
TAC
Val
>WENV183142778
OLOK01002861
338128
Bacillota
TTC
Glu
>WENV183142805
OLOK01003105
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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