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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
178 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183154299
OLOR01003039
24650
Bacillota
TAA
Leu
>WENV183154161
OLOR01002014
196621
Bacillota
GTC
Asp
>WENV183154703
OLOR01010310
309417
Bacillota
GGC
Ala
>WENV183154845
OLOR01018116
309417
Bacillota
GGC
Ala
>WENV183154599
OLOR01007461
155113
Bacillota
CGG
Pro
>WENV183153327
OLOR01000012
37213
Bacillota
TGA
Ser
>WENV183154434
OLOR01004434
144612
Bacillota
TCT
Arg
>WENV183153435
OLOR01000072
154063
Bacillota
CGG
Pro
>WENV183154300
OLOR01003041
267649
Bacillota
TAC
Val
>WENV183153714
OLOR01000410
235134
Bacillota
GAA
Phe
>WENV183154202
OLOR01002217
235134
Bacillota
GAA
Phe
>WENV183155032
OLOR01039068
235287
Bacillota
TTT
Lys
>WENV183154465
OLOR01004792
339890
Bacillota
TTG
Gln
>WENV183154089
OLOR01001514
235098
Bacillota
GAC
Val
>WENV183154414
OLOR01004136
235098
Bacillota
GAC
Val
>WENV183154525
OLOR01005807
235098
Bacillota
GAC
Val
>WENV183154705
OLOR01010380
235098
Bacillota
GAC
Val
>WENV183154894
OLOR01022561
235098
Bacillota
GAC
Val
>WENV183153508
OLOR01000117
338152
Bacillota
TTC
Glu
>WENV183154933
OLOR01025846
338152
Bacillota
TTC
Glu
>WENV183154874
OLOR01020712
44854
Bacillota
TGA
Ser
>WENV183154014
OLOR01001151
235154
Bacillota
GTT
Asn
>WENV183154286
OLOR01002884
304022
Bacillota
GCC
Gly
>WENV183154721
OLOR01011147
429443
Bacillota
GCA
Cys
>WENV183154832
OLOR01017421
307003
Bacillota
TGC
Ala
>WENV183154728
OLOR01011298
59312
Bacillota
CAG
Leu
>WENV183154480
OLOR01005135
238910
Bacillota
CTT
Lys
>WENV183154230
OLOR01002438
338147
Bacillota
CTC
Glu
>WENV183154657
OLOR01009015
338147
Bacillota
CTC
Glu
>WENV183154658
OLOR01009015
338147
Bacillota
CTC
Glu
>WENV183155170
OLOR01086098
235150
Bacillota
TGC
Ala
>WENV183153492
OLOR01000102
155273
Bacillota
CAT
Met
>WENV183155085
OLOR01047237
235137
Bacillota
TGC
Ala
>WENV183155029
OLOR01039068
338208
Bacillota
>WENV183154743
OLOR01011747
281701
Bacillota
TGC
Ala
>WENV183154970
OLOR01029519
235114
Bacillota
TTT
Lys
>WENV183154491
OLOR01005257
37083
Bacillota
TGA
Ser
>WENV183153554
OLOR01000169
429429
Bacillota
CCA
Trp
>WENV183153694
OLOR01000338
429429
Bacillota
CCA
Trp
>WENV183154238
OLOR01002532
429429
Bacillota
CCA
Trp
>WENV183154309
OLOR01003079
429429
Bacillota
CCA
Trp
>WENV183154488
OLOR01005199
429429
Bacillota
CCA
Trp
>WENV183154508
OLOR01005643
429429
Bacillota
CCA
Trp
>WENV183154555
OLOR01006472
429429
Bacillota
CCA
Trp
>WENV183154809
OLOR01015433
429429
Bacillota
CCA
Trp
>WENV183153881
OLOR01000707
313454
Bacillota
GAA
Phe
>WENV183154209
OLOR01002289
313454
Bacillota
GAA
Phe
>WENV183154270
OLOR01002737
313454
Bacillota
GAA
Phe
>WENV183154289
OLOR01002970
313454
Bacillota
GAA
Phe
>WENV183154831
OLOR01017325
313454
Bacillota
GAA
Phe
>WENV183154741
OLOR01011706
44859
Bacillota
AAG
Leu
>WENV183154198
OLOR01002207
11034
Bacillota
GGA
Ser
>WENV183154212
OLOR01002299
11034
Bacillota
GGA
Ser
>WENV183154444
OLOR01004564
11034
Bacillota
GGA
Ser
>WENV183154552
OLOR01006405
11034
Bacillota
GGA
Ser
>WENV183155031
OLOR01039068
235290
Bacillota
TTG
Gln
>WENV183154276
OLOR01002795
338550
Bacillota
>WENV183154547
OLOR01006277
114284
Bacillota
CAA
Leu
>WENV183154627
OLOR01008048
274189
Bacillota
TGT
Thr
>WENV183155037
OLOR01039068
144763
Bacillota
TGG
Pro
>WENV183154838
OLOR01017893
235087
Bacillota
TGC
Ala
>WENV183153571
OLOR01000191
149041
Bacillota
GTC
Asp
>WENV183155156
OLOR01079321
316443
Bacillota
GTC
Asp
>WENV183154381
OLOR01003789
338149
Bacillota
CTC
Glu
>WENV183154819
OLOR01016453
338149
Bacillota
CTC
Glu
>WENV183155035
OLOR01039068
144766
Bacillota
CAT
Met
>WENV183154647
OLOR01008665
245298
Bacillota
CGG
Pro
>WENV183154701
OLOR01010275
245298
Bacillota
CGG
Pro
>WENV183154415
OLOR01004158
37269
Bacillota
TGA
Ser
>WENV183153868
OLOR01000688
340131
Bacillota
GTT
Asn
>WENV183155145
OLOR01075753
155089
Bacillota
CAT
Met
>WENV183154222
OLOR01002372
287000
Bacillota
GTT
Asn
>WENV183154513
OLOR01005678
413152
Bacillota
TCC
Gly
>WENV183155132
OLOR01069077
201704
Bacillota
GAT
Ile
>WENV183153872
OLOR01000695
152492
Bacillota
GGG
Pro
>WENV183154112
OLOR01001618
152492
Bacillota
GGG
Pro
>WENV183154168
OLOR01002030
152492
Bacillota
GGG
Pro
>WENV183154737
OLOR01011437
152492
Bacillota
GGG
Pro
>WENV183154842
OLOR01018043
152492
Bacillota
GGG
Pro
>WENV183154862
OLOR01019975
152492
Bacillota
GGG
Pro
>WENV183153475
OLOR01000092
100326
Bacillota
GTA
Tyr
>WENV183155052
OLOR01040718
144610
Bacillota
GTG
His
>WENV183153294
OLOR01000001
240017
Bacillota
GCC
Gly
>WENV183153715
OLOR01000410
240017
Bacillota
GCC
Gly
>WENV183154203
OLOR01002217
240017
Bacillota
GCC
Gly
>WENV183153937
OLOR01000852
411547
Bacillota
CTG
Gln
>WENV183154074
OLOR01001388
411547
Bacillota
CTG
Gln
>WENV183154272
OLOR01002745
411547
Bacillota
CTG
Gln
>WENV183154395
OLOR01003957
411547
Bacillota
CTG
Gln
>WENV183154405
OLOR01003995
411547
Bacillota
CTG
Gln
>WENV183154646
OLOR01008665
411547
Bacillota
CTG
Gln
>WENV183154700
OLOR01010275
411547
Bacillota
CTG
Gln
>WENV183154847
OLOR01018476
411547
Bacillota
CTG
Gln
>WENV183153585
OLOR01000201
147684
Bacillota
ACG
Arg
>WENV183153893
OLOR01000738
147684
Bacillota
ACG
Arg
>WENV183154215
OLOR01002319
147684
Bacillota
ACG
Arg
>WENV183154949
OLOR01027941
147684
Bacillota
ACG
Arg
>WENV183154875
OLOR01020712
4624
Bacillota
GCT
Ser
>WENV183153293
OLOR01000001
263765
Bacillota
TAC
Val
>WENV183153712
OLOR01000410
263765
Bacillota
TAC
Val
>WENV183153730
OLOR01000420
263765
Bacillota
TAC
Val
>WENV183153809
OLOR01000570
263765
Bacillota
TAC
Val
>WENV183154200
OLOR01002217
263765
Bacillota
TAC
Val
>WENV183154591
OLOR01007365
263765
Bacillota
TAC
Val
>WENV183153620
OLOR01000247
412387
Bacillota
GCA
Cys
>WENV183153621
OLOR01000247
412387
Bacillota
GCA
Cys
>WENV183153377
OLOR01000037
313164
Bacillota
TTT
Lys
>WENV183154162
OLOR01002014
235095
Bacillota
GGT
Thr
>WENV183154163
OLOR01002014
235095
Bacillota
GGT
Thr
>WENV183154372
OLOR01003677
235095
Bacillota
GGT
Thr
>WENV183153573
OLOR01000191
239832
Bacillota
TGT
Thr
>WENV183154442
OLOR01004562
198159
Bacillota
CAT
Met
>WENV183154126
OLOR01001704
411549
Bacillota
TTG
Gln
>WENV183154142
OLOR01001808
411549
Bacillota
TTG
Gln
>WENV183154639
OLOR01008493
411549
Bacillota
TTG
Gln
>WENV183155010
OLOR01034951
411549
Bacillota
TTG
Gln
>WENV183154557
OLOR01006502
235142
Bacillota
CTT
Lys
>WENV183154083
OLOR01001449
148188
Bacillota
CCG
Arg
>WENV183154459
OLOR01004769
148188
Bacillota
CCG
Arg
>WENV183154505
OLOR01005592
148188
Bacillota
CCG
Arg
>WENV183154611
OLOR01007802
148188
Bacillota
CCG
Arg
>WENV183154795
OLOR01014537
298639
Bacillota
GTT
Asn
>WENV183154799
OLOR01014869
80612
Bacillota
GTA
Tyr
>WENV183154661
OLOR01009093
256380
Bacillota
>WENV183154466
OLOR01004792
235127
Bacillota
TTT
Lys
>WENV183154463
OLOR01004792
147674
Bacillota
TCT
Arg
>WENV183153802
OLOR01000561
163943
Bacillota
GTC
Asp
>WENV183155158
OLOR01079321
113225
Bacillota
TAG
Leu
>WENV183154825
OLOR01016762
298620
Bacillota
CAT
Met
>WENV183154934
OLOR01025846
241432
Bacillota
TGT
Thr
>WENV183153863
OLOR01000688
241432
Bacillota
TGT
Thr
>WENV183154493
OLOR01005267
411739
Bacillota
TCC
Gly
>WENV183154535
OLOR01006033
235638
Bacillota
GAA
Phe
>WENV183154077
OLOR01001407
235124
Bacillota
TGG
Pro
>WENV183154644
OLOR01008577
235124
Bacillota
TGG
Pro
>WENV183154810
OLOR01015453
235124
Bacillota
TGG
Pro
>WENV183154667
OLOR01009282
237963
Bacillota
TTT
Lys
>WENV183154664
OLOR01009282
201667
Bacillota
TCT
Arg
>WENV183154409
OLOR01004040
338129
Bacillota
TGT
Thr
>WENV183154481
OLOR01005161
338129
Bacillota
TGT
Thr
>WENV183154758
OLOR01012543
338129
Bacillota
TGT
Thr
>WENV183154665
OLOR01009282
279635
Bacillota
GTG
His
>WENV183153814
OLOR01000589
157838
Bacillota
GTC
Asp
>WENV183153941
OLOR01000854
157838
Bacillota
GTC
Asp
>WENV183154403
OLOR01003992
157838
Bacillota
GTC
Asp
>WENV183154174
OLOR01002077
144583
Bacillota
ACG
Arg
>WENV183154354
OLOR01003407
144583
Bacillota
ACG
Arg
>WENV183154879
OLOR01021152
247734
Bacillota
TGC
Ala
>WENV183154160
OLOR01002014
235171
Bacillota
CCA
Trp
>WENV183153787
OLOR01000522
238974
Bacillota
GAA
Phe
>WENV183154371
OLOR01003663
144621
Bacillota
GTT
Asn
>WENV183154382
OLOR01003789
144621
Bacillota
GTT
Asn
>WENV183154412
OLOR01004069
144621
Bacillota
GTT
Asn
>WENV183154445
OLOR01004570
144621
Bacillota
GTT
Asn
>WENV183154784
OLOR01013870
144621
Bacillota
GTT
Asn
>WENV183154820
OLOR01016453
144621
Bacillota
GTT
Asn
>WENV183154969
OLOR01029519
235113
Bacillota
GAA
Phe
>WENV183153792
OLOR01000534
353527
Bacillota
TTC
Glu
>WENV183154566
OLOR01006691
58712
Bacillota
CAG
Leu
>WENV183154755
OLOR01012379
58712
Bacillota
CAG
Leu
>WENV183154888
OLOR01021945
58712
Bacillota
CAG
Leu
>WENV183153784
OLOR01000520
21693
Bacillota
GCT
Ser
>WENV183154063
OLOR01001330
21693
Bacillota
GCT
Ser
>WENV183155030
OLOR01039068
144762
Bacillota
TCT
Arg
>WENV183153891
OLOR01000732
245296
Bacillota
CCC
Gly
>WENV183154529
OLOR01005873
245296
Bacillota
CCC
Gly
>WENV183154777
OLOR01013615
245296
Bacillota
CCC
Gly
>WENV183154836
OLOR01017834
245296
Bacillota
CCC
Gly
>WENV183153798
OLOR01000550
245296
Bacillota
CCC
Gly
>WENV183154457
OLOR01004702
144594
Bacillota
CAC
Val
>WENV183154458
OLOR01004744
144594
Bacillota
CAC
Val
>WENV183153346
OLOR01000019
114075
Bacillota
TAG
Leu
>WENV183154581
OLOR01006946
119513
Bacillota
CAA
Leu
>WENV183155023
OLOR01037804
292012
Bacillota
TGC
Ala
>WENV183153813
OLOR01000589
263523
Bacillota
TAC
Val
>WENV183153917
OLOR01000785
338128
Bacillota
TTC
Glu
>WENV183154135
OLOR01001746
338128
Bacillota
TTC
Glu
>WENV183154426
OLOR01004294
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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