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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183210573
OLQC01002536
196621
Bacillota
GTC
Asp
>WENV183211394
OLQC01053385
155958
Bacillota
GAT
Ile
>WENV183210223
OLQC01000746
158247
Bacillota
>WENV183210781
OLQC01005851
144612
Bacillota
TCT
Arg
>WENV183211134
OLQC01020467
144612
Bacillota
TCT
Arg
>WENV183209809
OLQC01000057
154063
Bacillota
CGG
Pro
>WENV183210693
OLQC01004115
339890
Bacillota
TTG
Gln
>WENV183210890
OLQC01008645
235098
Bacillota
GAC
Val
>WENV183210711
OLQC01004374
338152
Bacillota
TTC
Glu
>WENV183210563
OLQC01002471
44854
Bacillota
TGA
Ser
>WENV183211046
OLQC01014954
235154
Bacillota
GTT
Asn
>WENV183211001
OLQC01012537
359540
Bacillota
GTT
Asn
>WENV183209905
OLQC01000139
429443
Bacillota
GCA
Cys
>WENV183211285
OLQC01036688
429443
Bacillota
GCA
Cys
>WENV183211035
OLQC01014208
307003
Bacillota
TGC
Ala
>WENV183209841
OLQC01000076
59312
Bacillota
CAG
Leu
>WENV183209949
OLQC01000205
59312
Bacillota
CAG
Leu
>WENV183210768
OLQC01005309
59312
Bacillota
CAG
Leu
>WENV183210034
OLQC01000324
238910
Bacillota
CTT
Lys
>WENV183209701
OLQC01000015
338147
Bacillota
CTC
Glu
>WENV183209702
OLQC01000015
338147
Bacillota
CTC
Glu
>WENV183209703
OLQC01000015
338147
Bacillota
CTC
Glu
>WENV183210542
OLQC01002252
338147
Bacillota
CTC
Glu
>WENV183210553
OLQC01002386
338147
Bacillota
CTC
Glu
>WENV183211510
OLQC01086944
235150
Bacillota
TGC
Ala
>WENV183210025
OLQC01000307
155273
Bacillota
CAT
Met
>WENV183210551
OLQC01002374
235114
Bacillota
TTT
Lys
>WENV183211518
OLQC01089789
388249
Bacillota
GCA
Cys
>WENV183210714
OLQC01004374
144668
Bacillota
GTC
Asp
>WENV183210596
OLQC01002746
429429
Bacillota
CCA
Trp
>WENV183210697
OLQC01004215
429429
Bacillota
CCA
Trp
>WENV183209934
OLQC01000179
313454
Bacillota
GAA
Phe
>WENV183210166
OLQC01000598
313454
Bacillota
GAA
Phe
>WENV183210420
OLQC01001543
313454
Bacillota
GAA
Phe
>WENV183210823
OLQC01006949
313454
Bacillota
GAA
Phe
>WENV183210716
OLQC01004374
41154
Bacillota
TAA
Leu
>WENV183210912
OLQC01009258
44859
Bacillota
AAG
Leu
>WENV183210810
OLQC01006570
11034
Bacillota
GGA
Ser
>WENV183211168
OLQC01023038
11034
Bacillota
GGA
Ser
>WENV183210869
OLQC01008230
338550
Bacillota
>WENV183209864
OLQC01000095
274189
Bacillota
TGT
Thr
>WENV183211326
OLQC01041239
274189
Bacillota
TGT
Thr
>WENV183210638
OLQC01003468
235079
Bacillota
GAA
Phe
>WENV183210881
OLQC01008469
162028
Bacillota
ACG
Arg
>WENV183211184
OLQC01024612
173314
Bacillota
GAT
Ile
>WENV183211338
OLQC01044403
316443
Bacillota
GTC
Asp
>WENV183210909
OLQC01009142
338149
Bacillota
CTC
Glu
>WENV183210240
OLQC01000782
271471
Bacillota
GCC
Gly
>WENV183209862
OLQC01000095
271471
Bacillota
GCC
Gly
>WENV183211039
OLQC01014301
245298
Bacillota
CGG
Pro
>WENV183210203
OLQC01000675
37269
Bacillota
TGA
Ser
>WENV183210206
OLQC01000683
37269
Bacillota
TGA
Ser
>WENV183211117
OLQC01019303
155089
Bacillota
CAT
Met
>WENV183211026
OLQC01013823
413152
Bacillota
TCC
Gly
>WENV183211542
OLQC01098104
413152
Bacillota
TCC
Gly
>WENV183211549
OLQC01104056
42683
Bacillota
AAG
Leu
>WENV183209802
OLQC01000052
152149
Bacillota
GTG
His
>WENV183210515
OLQC01002093
162445
Bacillota
CAT
Met
>WENV183211166
OLQC01022588
162445
Bacillota
CAT
Met
>WENV183211213
OLQC01028055
201704
Bacillota
GAT
Ile
>WENV183209929
OLQC01000169
152492
Bacillota
GGG
Pro
>WENV183210150
OLQC01000558
152492
Bacillota
GGG
Pro
>WENV183210253
OLQC01000802
152492
Bacillota
GGG
Pro
>WENV183210508
OLQC01002023
152492
Bacillota
GGG
Pro
>WENV183210379
OLQC01001261
100326
Bacillota
GTA
Tyr
>WENV183209808
OLQC01000055
240017
Bacillota
GCC
Gly
>WENV183210394
OLQC01001377
411547
Bacillota
CTG
Gln
>WENV183209822
OLQC01000066
147684
Bacillota
ACG
Arg
>WENV183210489
OLQC01001872
147684
Bacillota
ACG
Arg
>WENV183210560
OLQC01002455
147684
Bacillota
ACG
Arg
>WENV183210564
OLQC01002471
4624
Bacillota
GCT
Ser
>WENV183209807
OLQC01000055
263765
Bacillota
TAC
Val
>WENV183210439
OLQC01001620
263765
Bacillota
TAC
Val
>WENV183209978
OLQC01000248
412387
Bacillota
GCA
Cys
>WENV183210258
OLQC01000823
412387
Bacillota
GCA
Cys
>WENV183210260
OLQC01000823
412387
Bacillota
GCA
Cys
>WENV183210816
OLQC01006722
412387
Bacillota
GCA
Cys
>WENV183211340
OLQC01044403
109476
Bacillota
TAG
Leu
>WENV183210663
OLQC01003767
18852
Bacillota
GCT
Ser
>WENV183210559
OLQC01002452
235095
Bacillota
GGT
Thr
>WENV183210574
OLQC01002536
235095
Bacillota
GGT
Thr
>WENV183210880
OLQC01008469
37193
Bacillota
TAA
Leu
>WENV183211477
OLQC01075713
154748
Bacillota
GTC
Asp
>WENV183210443
OLQC01001631
411549
Bacillota
TTG
Gln
>WENV183210731
OLQC01004520
411549
Bacillota
TTG
Gln
>WENV183210401
OLQC01001404
235142
Bacillota
CTT
Lys
>WENV183211429
OLQC01062694
59296
Bacillota
AAG
Leu
>WENV183211060
OLQC01015262
154711
Bacillota
TGG
Pro
>WENV183210752
OLQC01005128
148188
Bacillota
CCG
Arg
>WENV183210970
OLQC01011301
148188
Bacillota
CCG
Arg
>WENV183211118
OLQC01019308
148188
Bacillota
CCG
Arg
>WENV183211325
OLQC01041145
148188
Bacillota
CCG
Arg
>WENV183211113
OLQC01018889
80612
Bacillota
GTA
Tyr
>WENV183210207
OLQC01000687
256380
Bacillota
>WENV183210694
OLQC01004115
235127
Bacillota
TTT
Lys
>WENV183210691
OLQC01004115
147674
Bacillota
TCT
Arg
>WENV183210020
OLQC01000305
163943
Bacillota
GTC
Asp
>WENV183210422
OLQC01001557
163943
Bacillota
GTC
Asp
>WENV183210671
OLQC01003831
298620
Bacillota
CAT
Met
>WENV183211300
OLQC01037763
235288
Bacillota
TAC
Val
>WENV183210913
OLQC01009265
411739
Bacillota
TCC
Gly
>WENV183211302
OLQC01037840
235638
Bacillota
GAA
Phe
>WENV183210514
OLQC01002082
235124
Bacillota
TGG
Pro
>WENV183211164
OLQC01022369
235124
Bacillota
TGG
Pro
>WENV183210917
OLQC01009265
237963
Bacillota
TTT
Lys
>WENV183210914
OLQC01009265
201667
Bacillota
TCT
Arg
>WENV183210795
OLQC01006187
338129
Bacillota
TGT
Thr
>WENV183210847
OLQC01007518
338129
Bacillota
TGT
Thr
>WENV183211033
OLQC01014119
338129
Bacillota
TGT
Thr
>WENV183210915
OLQC01009265
279635
Bacillota
GTG
His
>WENV183211228
OLQC01029276
319167
Bacillota
CAT
Met
>WENV183210139
OLQC01000519
157838
Bacillota
GTC
Asp
>WENV183211111
OLQC01018423
144583
Bacillota
ACG
Arg
>WENV183211386
OLQC01050472
247734
Bacillota
TGC
Ala
>WENV183211516
OLQC01089150
235171
Bacillota
CCA
Trp
>WENV183209879
OLQC01000114
238974
Bacillota
GAA
Phe
>WENV183210910
OLQC01009142
144621
Bacillota
GTT
Asn
>WENV183210943
OLQC01009731
144621
Bacillota
GTT
Asn
>WENV183210550
OLQC01002374
235113
Bacillota
GAA
Phe
>WENV183210745
OLQC01004866
58712
Bacillota
CAG
Leu
>WENV183209815
OLQC01000062
157719
Bacillota
CAT
Met
>WENV183210338
OLQC01001080
245296
Bacillota
CCC
Gly
>WENV183210859
OLQC01007687
245296
Bacillota
CCC
Gly
>WENV183210964
OLQC01010965
272992
Bacillota
CTT
Lys
>WENV183211523
OLQC01091132
198135
Bacillota
GAT
Ile
>WENV183211183
OLQC01024612
299139
Bacillota
TGC
Ala
>WENV183210589
OLQC01002715
144594
Bacillota
CAC
Val
>WENV183210665
OLQC01003785
144594
Bacillota
CAC
Val
>WENV183210558
OLQC01002428
95563
Bacillota
GTA
Tyr
>WENV183211289
OLQC01037501
272488
Bacillota
GAA
Phe
>WENV183210744
OLQC01004860
119513
Bacillota
CAA
Leu
>WENV183211032
OLQC01014114
119513
Bacillota
CAA
Leu
>WENV183210874
OLQC01008469
146770
Bacillota
TTC
Glu
>WENV183209886
OLQC01000119
338128
Bacillota
TTC
Glu
>WENV183210645
OLQC01003552
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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