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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183215928
OLQH01000001
144589
Actinomycetota
ACG
Arg
>WENV183216082
OLQH01000152
235174
Actinomycetota
TGC
Ala
>WENV183216135
OLQH01000260
235101
Actinomycetota
TTT
Lys
>WENV183216289
OLQH01000715
145423
Actinomycetota
TCT
Arg
>WENV183216931
OLQH01029252
37212
Actinomycetota
GAG
Leu
>WENV183215995
OLQH01000024
145345
Actinomycetota
TAC
Val
>WENV183216206
OLQH01000443
254857
Actinomycetota
CCG
Arg
>WENV183215933
OLQH01000001
16223
Actinomycetota
GAG
Leu
>WENV183216006
OLQH01000036
44942
Actinomycetota
TGA
Ser
>WENV183215954
OLQH01000009
98279
Actinomycetota
GTA
Tyr
>WENV183215949
OLQH01000009
338148
Actinomycetota
CTG
Gln
>WENV183216061
OLQH01000117
235148
Actinomycetota
GTT
Asn
>WENV183216063
OLQH01000117
235148
Actinomycetota
GTT
Asn
>WENV183215930
OLQH01000001
145347
Actinomycetota
CAA
Leu
>WENV183215957
OLQH01000009
16467
Actinomycetota
GCT
Ser
>WENV183216074
OLQH01000135
411554
Actinomycetota
CCC
Gly
>WENV183215951
OLQH01000009
113601
Actinomycetota
TAG
Leu
>WENV183215962
OLQH01000011
145343
Actinomycetota
GGG
Pro
>WENV183215996
OLQH01000024
235149
Actinomycetota
CCT
Arg
>WENV183216009
OLQH01000036
145269
Actinomycetota
CAT
Met
>WENV183215950
OLQH01000009
235121
Actinomycetota
CGT
Thr
>WENV183215931
OLQH01000001
144635
Actinomycetota
TGG
Pro
>WENV183215929
OLQH01000001
119485
Actinomycetota
TAA
Leu
>WENV183216075
OLQH01000135
80622
Actinomycetota
CAG
Leu
>WENV183216008
OLQH01000036
147734
Actinomycetota
GTC
Asp
>WENV183216628
OLQH01003711
7409
Actinomycetota
CGA
Ser
>WENV183216677
OLQH01004510
158513
Actinomycetota
TGG
Pro
>WENV183216062
OLQH01000117
235173
Actinomycetota
GGC
Ala
>WENV183216083
OLQH01000152
235173
Actinomycetota
GGC
Ala
>WENV183215932
OLQH01000001
243162
Actinomycetota
GTT
Asn
>WENV183216054
OLQH01000103
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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