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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615552
OOEB01036886
166654
Gammaproteobacteria
GAC
Val
>WENV183615857
OOEB01192498
237766
Gammaproteobacteria
TAC
Val
>WENV183615448
OOEB01018802
279385
Gammaproteobacteria
TTT
Lys
>WENV183615508
OOEB01029460
281920
Gammaproteobacteria
CCA
Trp
>WENV183615517
OOEB01030603
249887
Gammaproteobacteria
GGT
Thr
>WENV183615351
OOEB01006898
269248
Gammaproteobacteria
CCA
Trp
>WENV183615398
OOEB01012075
149036
Gammaproteobacteria
CCA
Trp
>WENV183615525
OOEB01032586
340801
Gammaproteobacteria
CCT
Arg
>WENV183615548
OOEB01035793
6972
Gammaproteobacteria
>WENV183615330
OOEB01004865
277901
Gammaproteobacteria
TGT
Thr
>WENV183615567
OOEB01043289
412476
Gammaproteobacteria
TCC
Gly
>WENV183615687
OOEB01091879
173040
Gammaproteobacteria
GAC
Val
>WENV183615815
OOEB01161301
108266
Gammaproteobacteria
GTA
Tyr
>WENV183615263
OOEB01000318
148452
Gammaproteobacteria
CCT
Arg
>WENV183615408
OOEB01013458
241136
Gammaproteobacteria
TTG
Gln
>WENV183615563
OOEB01041597
235886
Gammaproteobacteria
TTC
Glu
>WENV183615715
OOEB01104997
237712
Gammaproteobacteria
TGT
Thr
>WENV183615569
OOEB01043829
186449
Gammaproteobacteria
TGG
Pro
>WENV183615855
OOEB01190472
243921
Gammaproteobacteria
TTT
Lys
>WENV183615411
OOEB01013815
262546
Gammaproteobacteria
TGC
Ala
>WENV183615731
OOEB01114618
237421
Gammaproteobacteria
TGT
Thr
>WENV183615845
OOEB01181555
237713
Gammaproteobacteria
TAC
Val
>WENV183615547
OOEB01035793
16460
Gammaproteobacteria
TGA
Ser
>WENV183615326
OOEB01004220
175964
Gammaproteobacteria
CAT
Met
>WENV183615703
OOEB01099229
150648
Gammaproteobacteria
TGG
Pro
>WENV183615635
OOEB01068738
59485
Gammaproteobacteria
CAG
Leu
>WENV183615714
OOEB01104997
237711
Gammaproteobacteria
GAA
Phe
>WENV183615301
OOEB01001734
273942
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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