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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183623109
OOFX01010964
166654
Gammaproteobacteria
GAC
Val
>WENV183623006
OOFX01001526
281920
Gammaproteobacteria
CCA
Trp
>WENV183623265
OOFX01046383
147053
Gammaproteobacteria
GTT
Asn
>WENV183623266
OOFX01046383
147053
Gammaproteobacteria
GTT
Asn
>WENV183623283
OOFX01055365
190137
Gammaproteobacteria
CAT
Met
>WENV183623205
OOFX01031498
338534
Gammaproteobacteria
TCC
Gly
>WENV183622997
OOFX01000924
412799
Gammaproteobacteria
GCA
Cys
>WENV183623029
OOFX01002717
199268
Gammaproteobacteria
ACG
Arg
>WENV183623244
OOFX01040761
277901
Gammaproteobacteria
TGT
Thr
>WENV183623038
OOFX01003298
237412
Gammaproteobacteria
TAC
Val
>WENV183623134
OOFX01015329
148452
Gammaproteobacteria
CCT
Arg
>WENV183623329
OOFX01078304
195303
Gammaproteobacteria
GAT
Ile
>WENV183622960
OOFX01000004
262546
Gammaproteobacteria
TGC
Ala
>WENV183623035
OOFX01003125
240536
Gammaproteobacteria
TTT
Lys
>WENV183623180
OOFX01025457
150648
Gammaproteobacteria
TGG
Pro
>WENV183623151
OOFX01019327
10850
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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