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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742214
PJUH01001942
23711
Gammaproteobacteria
GGA
Ser
>WENV183741972
PJUH01000021
7214
Gammaproteobacteria
GCT
Ser
>WENV183742285
PJUH01006154
147029
Gammaproteobacteria
CCT
Arg
>WENV183741905
PJUH01000005
412176
Gammaproteobacteria
CCC
Gly
>WENV183742268
PJUH01004704
238674
Gammaproteobacteria
TGT
Thr
>WENV183742117
PJUH01000356
51143
Gammaproteobacteria
TGA
Ser
>WENV183742326
PJUH01008624
411594
Gammaproteobacteria
TCC
Gly
>WENV183742074
PJUH01000155
16446
Gammaproteobacteria
GCT
Ser
>WENV183742142
PJUH01000505
279806
Gammaproteobacteria
TGT
Thr
>WENV183742417
PJUH01028992
279806
Gammaproteobacteria
TGT
Thr
>WENV183741882
PJUH01000001
182303
Gammaproteobacteria
GTG
His
>WENV183742006
PJUH01000039
266908
Gammaproteobacteria
CGC
Ala
>WENV183742197
PJUH01001228
412442
Gammaproteobacteria
GCA
Cys
>WENV183742133
PJUH01000422
238307
Gammaproteobacteria
GAA
Phe
>WENV183742158
PJUH01000811
96066
Gammaproteobacteria
TAA
Leu
>WENV183742075
PJUH01000155
165964
Gammaproteobacteria
ACG
Arg
>WENV183742076
PJUH01000155
165964
Gammaproteobacteria
ACG
Arg
>WENV183742165
PJUH01000892
165964
Gammaproteobacteria
ACG
Arg
>WENV183742166
PJUH01000892
165964
Gammaproteobacteria
ACG
Arg
>WENV183742438
PJUH01035159
165964
Gammaproteobacteria
ACG
Arg
>WENV183742439
PJUH01035159
165964
Gammaproteobacteria
ACG
Arg
>WENV183742167
PJUH01000892
147595
Gammaproteobacteria
CCT
Arg
>WENV183741904
PJUH01000005
353410
Gammaproteobacteria
CTG
Gln
>WENV183741870
PJUH01000001
16238
Gammaproteobacteria
CGA
Ser
>WENV183742294
PJUH01006853
16238
Gammaproteobacteria
CGA
Ser
>WENV183742150
PJUH01000635
145334
Gammaproteobacteria
CCG
Arg
>WENV183742236
PJUH01003081
145334
Gammaproteobacteria
CCG
Arg
>WENV183742063
PJUH01000125
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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