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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183793284
PVBE010001224
165001
Bacteroidota
GTT
Asn
>WENV183800215
PVBE010570673
165001
Bacteroidota
GTT
Asn
>WENV183803096
PVBE010811511
165001
Bacteroidota
GTT
Asn
>WENV183811067
PVBE011542886
165001
Bacteroidota
GTT
Asn
>WENV183804948
PVBE010974140
267954
Bacteroidota
GCC
Gly
>WENV183807310
PVBE011189250
237361
Bacteroidota
TTG
Gln
>WENV183803532
PVBE010853251
180185
Bacteroidota
TGC
Ala
>WENV183794592
PVBE010109092
127464
Bacteroidota
TAC
Val
>WENV183794162
PVBE010074929
102360
Bacteroidota
TAG
Leu
>WENV183803026
PVBE010806604
236125
Bacteroidota
GAA
Phe
>WENV183803684
PVBE010864762
236125
Bacteroidota
GAA
Phe
>WENV183801782
PVBE010703451
127458
Bacteroidota
GAC
Val
>WENV183802067
PVBE010730514
127458
Bacteroidota
GAC
Val
>WENV183810398
PVBE011480412
127458
Bacteroidota
GAC
Val
>WENV183798575
PVBE010429714
60611
Bacteroidota
GCT
Ser
>WENV183802522
PVBE010765772
151405
Bacteroidota
TGC
Ala
>WENV183808943
PVBE011340760
37569
Bacteroidota
TAA
Leu
>WENV183811391
PVBE011576634
37569
Bacteroidota
TAA
Leu
>WENV183794468
PVBE010100384
127414
Bacteroidota
TGG
Pro
>WENV183803507
PVBE010851025
127414
Bacteroidota
TGG
Pro
>WENV183804693
PVBE010951092
127414
Bacteroidota
TGG
Pro
>WENV183807874
PVBE011242207
127414
Bacteroidota
TGG
Pro
>WENV183809386
PVBE011383072
127414
Bacteroidota
TGG
Pro
>WENV183793521
PVBE010021074
238764
Bacteroidota
>WENV183801219
PVBE010655187
238764
Bacteroidota
>WENV183809607
PVBE011402403
238764
Bacteroidota
>WENV183810420
PVBE011482741
238764
Bacteroidota
>WENV183801786
PVBE010703922
242524
Bacteroidota
GCC
Gly
>WENV183799050
PVBE010471393
274593
Bacteroidota
TTG
Gln
>WENV183808167
PVBE011269977
274593
Bacteroidota
TTG
Gln
>WENV183811761
PVBE011612453
17987
Bacteroidota
GGA
Ser
>WENV183796927
PVBE010289722
235935
Bacteroidota
TCC
Gly
>WENV183805445
PVBE011020310
259147
Bacteroidota
TTT
Lys
>WENV183794975
PVBE010137930
159518
Bacteroidota
GAT
Ile
>WENV183809385
PVBE011383072
59930
Bacteroidota
GCT
Ser
>WENV183809879
PVBE011427826
80676
Bacteroidota
GTA
Tyr
>WENV183803945
PVBE010888289
150454
Bacteroidota
TGT
Thr
>WENV183810459
PVBE011486479
150454
Bacteroidota
TGT
Thr
>WENV183798062
PVBE010386556
145555
Bacteroidota
GTC
Asp
>WENV183798623
PVBE010434217
145555
Bacteroidota
GTC
Asp
>WENV183801459
PVBE010677016
145555
Bacteroidota
GTC
Asp
>WENV183807322
PVBE011190669
153768
Bacteroidota
TGC
Ala
>WENV183801365
PVBE010670937
240901
Bacteroidota
TTT
Lys
>WENV183806135
PVBE011087604
360599
Bacteroidota
GGT
Thr
>WENV183801553
PVBE010685064
47350
Bacteroidota
TGA
Ser
>WENV183806615
PVBE011132541
48914
Bacteroidota
TGA
Ser
>WENV183811328
PVBE011571716
179613
Bacteroidota
CAT
Met
>WENV183805202
PVBE010997563
152405
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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