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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183812119
PYLN01000081
146232
Chlorobiota
GGG
Pro
>WENV183812123
PYLN01000145
95795
Chlorobiota
CAG
Leu
>WENV183812124
PYLN01000153
236827
Chlorobiota
TTT
Lys
>WENV183812096
PYLN01000005
146283
Chlorobiota
TAC
Val
>WENV183812100
PYLN01000018
236974
Chlorobiota
TGC
Ala
>WENV183812101
PYLN01000025
238645
Chlorobiota
GGC
Ala
>WENV183812126
PYLN01000163
236833
Chlorobiota
CGT
Thr
>WENV183812122
PYLN01000144
126816
Chlorobiota
GTC
Asp
>WENV183812125
PYLN01000153
95811
Chlorobiota
GAG
Leu
>WENV183812095
PYLN01000002
236663
Chlorobiota
CCA
Trp
>WENV183812109
PYLN01000053
146165
Chlorobiota
GTG
His
>WENV183812111
PYLN01000055
105037
Chlorobiota
TAG
Leu
>WENV183812114
PYLN01000073
235782
Chlorobiota
CAT
Met
>WENV183812094
PYLN01000002
236662
Chlorobiota
GGT
Thr
>WENV183812098
PYLN01000013
319359
Chlorobiota
CGC
Ala
>WENV183812105
PYLN01000028
412434
Chlorobiota
GCA
Cys
>WENV183812121
PYLN01000112
146381
Chlorobiota
CAT
Met
>WENV183812127
PYLN01000181
146381
Chlorobiota
CAT
Met
>WENV183812116
PYLN01000076
147905
Chlorobiota
CTC
Glu
>WENV183812128
PYLN01000181
236933
Chlorobiota
CCC
Gly
>WENV183812097
PYLN01000012
237026
Chlorobiota
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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