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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1005875
SRR014589.4759
236259
Bacillota
TGT
Thr
>SRA1005921
SRR014589.46528
236259
Bacillota
TGT
Thr
>SRA1005923
SRR014589.49598
236259
Bacillota
TGT
Thr
>SRA1005932
SRR014589.58943
236259
Bacillota
TGT
Thr
>SRA1006019
SRR014589.116901
236259
Bacillota
TGT
Thr
>SRA1006039
SRR014589.137569
236259
Bacillota
TGT
Thr
>SRA1006041
SRR014589.138116
236259
Bacillota
TGT
Thr
>SRA1006046
SRR014589.145081
236259
Bacillota
TGT
Thr
>SRA1006090
SRR014589.177647
236259
Bacillota
TGT
Thr
>SRA1006123
SRR014589.222739
236259
Bacillota
TGT
Thr
>SRA1006128
SRR014589.234492
236259
Bacillota
TGT
Thr
>SRA1005962
SRR014589.75143
339265
Bacillota
TTC
Glu
>SRA1005982
SRR014589.88914
339265
Bacillota
TTC
Glu
>SRA1006096
SRR014589.182197
339265
Bacillota
TTC
Glu
>SRA1006101
SRR014589.188561
339265
Bacillota
TTC
Glu
>SRA1005908
SRR014589.37626
146971
Bacillota
TGG
Pro
>SRA1005915
SRR014589.42015
146971
Bacillota
TGG
Pro
>SRA1005954
SRR014589.71505
146971
Bacillota
TGG
Pro
>SRA1005974
SRR014589.86346
146971
Bacillota
TGG
Pro
>SRA1005975
SRR014589.86371
146971
Bacillota
TGG
Pro
>SRA1005978
SRR014589.87262
146971
Bacillota
TGG
Pro
>SRA1005988
SRR014589.91267
146971
Bacillota
TGG
Pro
>SRA1006004
SRR014589.98471
146971
Bacillota
TGG
Pro
>SRA1006027
SRR014589.124704
146971
Bacillota
TGG
Pro
>SRA1006029
SRR014589.124873
146971
Bacillota
TGG
Pro
>SRA1006057
SRR014589.153243
146971
Bacillota
TGG
Pro
>SRA1006061
SRR014589.157103
146971
Bacillota
TGG
Pro
>SRA1006063
SRR014589.157591
146971
Bacillota
TGG
Pro
>SRA1006081
SRR014589.174196
146971
Bacillota
TGG
Pro
>SRA1006106
SRR014589.195808
146971
Bacillota
TGG
Pro
>SRA1006114
SRR014589.204962
146971
Bacillota
TGG
Pro
>SRA1006120
SRR014589.219980
146971
Bacillota
TGG
Pro
>SRA1005878
SRR014589.7061
244187
Bacillota
TTT
Lys
>SRA1005901
SRR014589.31195
244187
Bacillota
TTT
Lys
>SRA1005902
SRR014589.33570
244187
Bacillota
TTT
Lys
>SRA1005933
SRR014589.60360
244187
Bacillota
TTT
Lys
>SRA1005937
SRR014589.62685
244187
Bacillota
TTT
Lys
>SRA1006017
SRR014589.115953
244187
Bacillota
TTT
Lys
>SRA1006049
SRR014589.148767
244187
Bacillota
TTT
Lys
>SRA1006064
SRR014589.157602
244187
Bacillota
TTT
Lys
>SRA1006110
SRR014589.203286
244187
Bacillota
TTT
Lys
>SRA1005883
SRR014589.11546
146972
Bacillota
GTC
Asp
>SRA1005885
SRR014589.12948
146972
Bacillota
GTC
Asp
>SRA1005917
SRR014589.42473
146972
Bacillota
GTC
Asp
>SRA1005931
SRR014589.58943
146972
Bacillota
GTC
Asp
>SRA1006018
SRR014589.116901
146972
Bacillota
GTC
Asp
>SRA1006045
SRR014589.145081
146972
Bacillota
GTC
Asp
>SRA1006078
SRR014589.169626
146972
Bacillota
GTC
Asp
>SRA1006089
SRR014589.177647
146972
Bacillota
GTC
Asp
>SRA1006103
SRR014589.190690
146972
Bacillota
GTC
Asp
>SRA1005926
SRR014589.53829
10594
Bacillota
GCT
Ser
>SRA1005961
SRR014589.75143
10594
Bacillota
GCT
Ser
>SRA1005970
SRR014589.82196
10594
Bacillota
GCT
Ser
>SRA1005981
SRR014589.88914
10594
Bacillota
GCT
Ser
>SRA1005990
SRR014589.91859
10594
Bacillota
GCT
Ser
>SRA1006068
SRR014589.159752
10594
Bacillota
GCT
Ser
>SRA1006075
SRR014589.168928
10594
Bacillota
GCT
Ser
>SRA1006100
SRR014589.188561
10594
Bacillota
GCT
Ser
>SRA1006105
SRR014589.195394
10594
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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