This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1027503
SRR035086.137275
95676
Bacteroidota
TAG
Leu
>SRA1027759
SRR035086.187845
99288
Bacteroidota
TAG
Leu
>SRA1027870
SRR035086.210191
99288
Bacteroidota
TAG
Leu
>SRA1028177
SRR035086.270563
135906
Bacteroidota
TAC
Val
>SRA1027648
SRR035086.166261
145151
Bacteroidota
TGG
Pro
>SRA1028262
SRR035086.288033
151513
Bacteroidota
TGC
Ala
>SRA1028707
SRR035086.405586
364423
Bacteroidota
GGT
Thr
>SRA1028228
SRR035086.279831
48914
Bacteroidota
TGA
Ser
>SRA1027830
SRR035086.203277
308806
Bacteroidota
TCC
Gly
>SRA1028395
SRR035086.316603
185921
Bacteroidota
GTC
Asp
>SRA1028761
SRR035086.427323
197066
Bacteroidota
GTT
Asn
>SRA1028159
SRR035086.268392
97610
Bacteroidota
GTA
Tyr
>SRA1028376
SRR035086.311190
172532
Bacteroidota
GTC
Asp
>SRA1028082
SRR035086.255052
338568
Bacteroidota
TTC
Glu
>SRA1028083
SRR035086.255366
235746
Bacteroidota
GAA
Phe
>SRA1027432
SRR035086.124316
159518
Bacteroidota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK