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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1046202
SRR035093.253138
236662
Chlorobiota
GGT
Thr
>SRA1047311
SRR035093.507441
236662
Chlorobiota
GGT
Thr
>SRA1045809
SRR035093.173783
146381
Chlorobiota
CAT
Met
>SRA1047518
SRR035093.564664
146381
Chlorobiota
CAT
Met
>SRA1047564
SRR035093.580943
146381
Chlorobiota
CAT
Met
>SRA1045891
SRR035093.190883
80756
Chlorobiota
GTA
Tyr
>SRA1046201
SRR035093.253138
80756
Chlorobiota
GTA
Tyr
>SRA1046637
SRR035093.349835
80756
Chlorobiota
GTA
Tyr
>SRA1045413
SRR035093.88361
238645
Chlorobiota
GGC
Ala
>SRA1047507
SRR035093.560476
238645
Chlorobiota
GGC
Ala
>SRA1047195
SRR035093.479804
236753
Chlorobiota
TGG
Pro
>SRA1046940
SRR035093.422977
236753
Chlorobiota
TGG
Pro
>SRA1045381
SRR035093.81451
236833
Chlorobiota
CGT
Thr
>SRA1045415
SRR035093.90143
236833
Chlorobiota
CGT
Thr
>SRA1045550
SRR035093.120089
236833
Chlorobiota
CGT
Thr
>SRA1046745
SRR035093.374988
236833
Chlorobiota
CGT
Thr
>SRA1047235
SRR035093.491100
146232
Chlorobiota
GGG
Pro
>SRA1045215
SRR035093.32691
236933
Chlorobiota
CCC
Gly
>SRA1045810
SRR035093.173783
236933
Chlorobiota
CCC
Gly
>SRA1046989
SRR035093.430227
236933
Chlorobiota
CCC
Gly
>SRA1047519
SRR035093.564664
236933
Chlorobiota
CCC
Gly
>SRA1047565
SRR035093.580943
236933
Chlorobiota
CCC
Gly
>SRA1045277
SRR035093.51815
237026
Chlorobiota
CGG
Pro
>SRA1045281
SRR035093.55137
95795
Chlorobiota
CAG
Leu
>SRA1045459
SRR035093.98521
95795
Chlorobiota
CAG
Leu
>SRA1045558
SRR035093.121875
95795
Chlorobiota
CAG
Leu
>SRA1045647
SRR035093.140781
95795
Chlorobiota
CAG
Leu
>SRA1046015
SRR035093.217155
95795
Chlorobiota
CAG
Leu
>SRA1046141
SRR035093.244001
95795
Chlorobiota
CAG
Leu
>SRA1046280
SRR035093.269558
95795
Chlorobiota
CAG
Leu
>SRA1046459
SRR035093.313301
95795
Chlorobiota
CAG
Leu
>SRA1046863
SRR035093.401634
95795
Chlorobiota
CAG
Leu
>SRA1047379
SRR035093.528579
95795
Chlorobiota
CAG
Leu
>SRA1047413
SRR035093.532810
95795
Chlorobiota
CAG
Leu
>SRA1047427
SRR035093.536187
95795
Chlorobiota
CAG
Leu
>SRA1045995
SRR035093.212395
339069
Chlorobiota
TTG
Gln
>SRA1045171
SRR035093.18861
236827
Chlorobiota
TTT
Lys
>SRA1047472
SRR035093.548684
236827
Chlorobiota
TTT
Lys
>SRA1045659
SRR035093.142692
126816
Chlorobiota
GTC
Asp
>SRA1045961
SRR035093.206390
126816
Chlorobiota
GTC
Asp
>SRA1046134
SRR035093.243331
126816
Chlorobiota
GTC
Asp
>SRA1047223
SRR035093.487213
126816
Chlorobiota
GTC
Asp
>SRA1046022
SRR035093.217743
146165
Chlorobiota
GTG
His
>SRA1046211
SRR035093.253838
146165
Chlorobiota
GTG
His
>SRA1046978
SRR035093.429532
146165
Chlorobiota
GTG
His
>SRA1046203
SRR035093.253138
236663
Chlorobiota
CCA
Trp
>SRA1047312
SRR035093.507441
236663
Chlorobiota
CCA
Trp
>SRA1045788
SRR035093.169739
146283
Chlorobiota
TAC
Val
>SRA1045967
SRR035093.206923
146283
Chlorobiota
TAC
Val
>SRA1046083
SRR035093.232459
146283
Chlorobiota
TAC
Val
>SRA1046457
SRR035093.313057
146283
Chlorobiota
TAC
Val
>SRA1047407
SRR035093.531693
235782
Chlorobiota
CAT
Met
>SRA1047178
SRR035093.476891
236974
Chlorobiota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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