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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1051818
SRR035098.82624
388111
Actinomycetota
>SRA1051872
SRR035098.90867
388111
Actinomycetota
>SRA1052538
SRR035098.223245
388111
Actinomycetota
>SRA1052926
SRR035098.300857
388111
Actinomycetota
>SRA1053072
SRR035098.330945
388111
Actinomycetota
>SRA1053501
SRR035098.420540
388111
Actinomycetota
>SRA1052494
SRR035098.214847
127865
Actinomycetota
GAT
Ile
>SRA1051802
SRR035098.78951
153188
Actinomycetota
CAT
Met
>SRA1051927
SRR035098.105267
153188
Actinomycetota
CAT
Met
>SRA1052518
SRR035098.219588
153188
Actinomycetota
CAT
Met
>SRA1052794
SRR035098.277162
153188
Actinomycetota
CAT
Met
>SRA1052267
SRR035098.172800
50066
Actinomycetota
GGA
Ser
>SRA1053013
SRR035098.317956
50066
Actinomycetota
GGA
Ser
>SRA1053194
SRR035098.359300
50066
Actinomycetota
GGA
Ser
>SRA1053289
SRR035098.375421
50066
Actinomycetota
GGA
Ser
>SRA1052615
SRR035098.237742
374962
Actinomycetota
CCT
Arg
>SRA1051775
SRR035098.74556
255588
Actinomycetota
CCG
Arg
>SRA1053424
SRR035098.403064
255588
Actinomycetota
CCG
Arg
>SRA1053591
SRR035098.445953
186463
Actinomycetota
GAT
Ile
>SRA1052898
SRR035098.296140
105043
Actinomycetota
TAG
Leu
>SRA1053595
SRR035098.447902
344531
Actinomycetota
GCC
Gly
>SRA1051579
SRR035098.34067
338763
Actinomycetota
GCC
Gly
>SRA1051580
SRR035098.34343
338763
Actinomycetota
GCC
Gly
>SRA1051725
SRR035098.64457
338763
Actinomycetota
GCC
Gly
>SRA1051819
SRR035098.82624
338763
Actinomycetota
GCC
Gly
>SRA1052057
SRR035098.132323
338763
Actinomycetota
GCC
Gly
>SRA1052927
SRR035098.300857
338763
Actinomycetota
GCC
Gly
>SRA1052990
SRR035098.315265
338763
Actinomycetota
GCC
Gly
>SRA1053078
SRR035098.332294
338763
Actinomycetota
GCC
Gly
>SRA1052771
SRR035098.272381
411983
Actinomycetota
TCC
Gly
>SRA1052870
SRR035098.288862
411983
Actinomycetota
TCC
Gly
>SRA1052890
SRR035098.293618
411983
Actinomycetota
TCC
Gly
>SRA1052967
SRR035098.309792
411983
Actinomycetota
TCC
Gly
>SRA1052981
SRR035098.312765
411983
Actinomycetota
TCC
Gly
>SRA1053112
SRR035098.341004
411983
Actinomycetota
TCC
Gly
>SRA1053136
SRR035098.346170
411983
Actinomycetota
TCC
Gly
>SRA1053295
SRR035098.376877
411983
Actinomycetota
TCC
Gly
>SRA1053469
SRR035098.412735
411983
Actinomycetota
TCC
Gly
>SRA1052653
SRR035098.245277
146885
Actinomycetota
TGG
Pro
>SRA1053121
SRR035098.342665
146885
Actinomycetota
TGG
Pro
>SRA1053135
SRR035098.346170
146885
Actinomycetota
TGG
Pro
>SRA1053535
SRR035098.431862
146885
Actinomycetota
TGG
Pro
>SRA1053876
SRR035098.523865
146885
Actinomycetota
TGG
Pro
>SRA1053900
SRR035098.530883
146885
Actinomycetota
TGG
Pro
>SRA1051486
SRR035098.13517
290785
Actinomycetota
TTT
Lys
>SRA1053061
SRR035098.327763
290785
Actinomycetota
TTT
Lys
>SRA1053300
SRR035098.377604
290785
Actinomycetota
TTT
Lys
>SRA1052447
SRR035098.205645
237593
Actinomycetota
GTT
Asn
>SRA1052974
SRR035098.311443
237593
Actinomycetota
GTT
Asn
>SRA1051806
SRR035098.80000
312709
Actinomycetota
TTC
Glu
>SRA1051900
SRR035098.99162
312709
Actinomycetota
TTC
Glu
>SRA1052440
SRR035098.204588
312709
Actinomycetota
TTC
Glu
>SRA1052478
SRR035098.211332
312709
Actinomycetota
TTC
Glu
>SRA1052848
SRR035098.284871
312709
Actinomycetota
TTC
Glu
>SRA1053069
SRR035098.330210
312709
Actinomycetota
TTC
Glu
>SRA1053250
SRR035098.368768
312709
Actinomycetota
TTC
Glu
>SRA1053550
SRR035098.434579
312709
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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