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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1051991
SRR035098.120491
236662
Chlorobiota
GGT
Thr
>SRA1053321
SRR035098.382486
146381
Chlorobiota
CAT
Met
>SRA1052816
SRR035098.281277
146381
Chlorobiota
CAT
Met
>SRA1053338
SRR035098.386680
80756
Chlorobiota
GTA
Tyr
>SRA1052359
SRR035098.187453
319359
Chlorobiota
CGC
Ala
>SRA1052333
SRR035098.183483
319359
Chlorobiota
CGC
Ala
>SRA1052251
SRR035098.167881
146232
Chlorobiota
GGG
Pro
>SRA1051923
SRR035098.103855
146232
Chlorobiota
GGG
Pro
>SRA1051703
SRR035098.61332
146232
Chlorobiota
GGG
Pro
>SRA1053496
SRR035098.418373
236741
Chlorobiota
CCG
Arg
>SRA1053322
SRR035098.382486
236933
Chlorobiota
CCC
Gly
>SRA1052817
SRR035098.281277
236933
Chlorobiota
CCC
Gly
>SRA1053807
SRR035098.501458
237026
Chlorobiota
CGG
Pro
>SRA1053543
SRR035098.433512
237026
Chlorobiota
CGG
Pro
>SRA1052680
SRR035098.251813
95795
Chlorobiota
CAG
Leu
>SRA1051959
SRR035098.114354
95795
Chlorobiota
CAG
Leu
>SRA1053318
SRR035098.381792
339069
Chlorobiota
TTG
Gln
>SRA1053315
SRR035098.381453
339069
Chlorobiota
TTG
Gln
>SRA1052876
SRR035098.290102
339069
Chlorobiota
TTG
Gln
>SRA1052748
SRR035098.265737
236827
Chlorobiota
TTT
Lys
>SRA1051929
SRR035098.106480
95811
Chlorobiota
GAG
Leu
>SRA1053092
SRR035098.334341
235782
Chlorobiota
CAT
Met
>SRA1052282
SRR035098.174958
235782
Chlorobiota
CAT
Met
>SRA1051970
SRR035098.114985
235782
Chlorobiota
CAT
Met
>SRA1053560
SRR035098.437245
236974
Chlorobiota
TGC
Ala
>SRA1052250
SRR035098.167810
236974
Chlorobiota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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