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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09001479
ABSR01015931
188716
Betaproteobacteria
ACG
Arg
>ENV09001492
ABSR01018400
284821
Betaproteobacteria
TTT
Lys
>ENV09001315
ABSR01001258
284666
Betaproteobacteria
TAC
Val
>ENV09001324
ABSR01001410
284666
Betaproteobacteria
TAC
Val
>ENV09001336
ABSR01002106
284666
Betaproteobacteria
TAC
Val
>ENV09001340
ABSR01002289
284666
Betaproteobacteria
TAC
Val
>ENV09001381
ABSR01004080
284666
Betaproteobacteria
TAC
Val
>ENV09001524
ABSR01024360
284666
Betaproteobacteria
TAC
Val
>ENV09001463
ABSR01012140
117923
Betaproteobacteria
CAG
Leu
>ENV09001597
ABSR01035182
176193
Betaproteobacteria
TTG
Gln
>ENV09001466
ABSR01012996
281431
Betaproteobacteria
GTT
Asn
>ENV09001301
ABSR01000793
117806
Betaproteobacteria
GTA
Tyr
>ENV09001318
ABSR01001339
117806
Betaproteobacteria
GTA
Tyr
>ENV09001398
ABSR01004748
117806
Betaproteobacteria
GTA
Tyr
>ENV09001376
ABSR01003989
229245
Betaproteobacteria
GAT
Ile
>ENV09001291
ABSR01000622
229245
Betaproteobacteria
GAT
Ile
>ENV09001533
ABSR01025017
179863
Betaproteobacteria
TGG
Pro
>ENV09001282
ABSR01000169
179863
Betaproteobacteria
TGG
Pro
>ENV09001304
ABSR01000873
179863
Betaproteobacteria
TGG
Pro
>ENV09001312
ABSR01001194
179863
Betaproteobacteria
TGG
Pro
>ENV09001322
ABSR01001345
179863
Betaproteobacteria
TGG
Pro
>ENV09001326
ABSR01001481
179863
Betaproteobacteria
TGG
Pro
>ENV09001343
ABSR01002296
179863
Betaproteobacteria
TGG
Pro
>ENV09001348
ABSR01002410
179863
Betaproteobacteria
TGG
Pro
>ENV09001364
ABSR01003424
179863
Betaproteobacteria
TGG
Pro
>ENV09001370
ABSR01003714
179863
Betaproteobacteria
TGG
Pro
>ENV09001390
ABSR01004580
179863
Betaproteobacteria
TGG
Pro
>ENV09001424
ABSR01006578
179863
Betaproteobacteria
TGG
Pro
>ENV09001471
ABSR01013550
179863
Betaproteobacteria
TGG
Pro
>ENV09001399
ABSR01005039
111196
Betaproteobacteria
GTA
Tyr
>ENV09001413
ABSR01005822
178430
Betaproteobacteria
TTG
Gln
>ENV09001274
ABSR01000022
178430
Betaproteobacteria
TTG
Gln
>ENV09001510
ABSR01021136
198132
Betaproteobacteria
CAT
Met
>ENV09001600
ABSR01035625
177009
Betaproteobacteria
GGG
Pro
>ENV09001585
ABSR01033817
177009
Betaproteobacteria
GGG
Pro
>ENV09001388
ABSR01004349
177009
Betaproteobacteria
GGG
Pro
>ENV09001373
ABSR01003855
177009
Betaproteobacteria
GGG
Pro
>ENV09001285
ABSR01000468
177009
Betaproteobacteria
GGG
Pro
>ENV09001556
ABSR01028817
118799
Betaproteobacteria
GAG
Leu
>ENV09001490
ABSR01017934
118799
Betaproteobacteria
GAG
Leu
>ENV09001451
ABSR01010277
118799
Betaproteobacteria
GAG
Leu
>ENV09001430
ABSR01006889
118799
Betaproteobacteria
GAG
Leu
>ENV09001344
ABSR01002358
118799
Betaproteobacteria
GAG
Leu
>ENV09001329
ABSR01001801
118799
Betaproteobacteria
GAG
Leu
>ENV09001307
ABSR01001049
118799
Betaproteobacteria
GAG
Leu
>ENV09001299
ABSR01000764
118799
Betaproteobacteria
GAG
Leu
>ENV09001302
ABSR01000793
283554
Betaproteobacteria
TCC
Gly
>ENV09001319
ABSR01001339
283554
Betaproteobacteria
TCC
Gly
>ENV09001401
ABSR01005039
414048
Betaproteobacteria
GGT
Thr
>ENV09001587
ABSR01033874
340615
Betaproteobacteria
TGC
Ala
>ENV09001468
ABSR01013256
340615
Betaproteobacteria
TGC
Ala
>ENV09001441
ABSR01008692
340615
Betaproteobacteria
TGC
Ala
>ENV09001384
ABSR01004128
340615
Betaproteobacteria
TGC
Ala
>ENV09001377
ABSR01003989
340615
Betaproteobacteria
TGC
Ala
>ENV09001335
ABSR01001956
340615
Betaproteobacteria
TGC
Ala
>ENV09001297
ABSR01000690
340615
Betaproteobacteria
TGC
Ala
>ENV09001277
ABSR01000098
340615
Betaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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