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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11101864
AGFS01162904
400361
Gammaproteobacteria
TCC
Gly
>WENV170001792
AGFS01162904
400361
Gammaproteobacteria
TCC
Gly
>WENV11101669
AGFS01101512
480351
Gammaproteobacteria
CCC
Gly
>WENV11101714
AGFS01114485
480351
Gammaproteobacteria
CCC
Gly
>WENV170001597
AGFS01101512
480351
Gammaproteobacteria
CCC
Gly
>WENV170001642
AGFS01114485
480351
Gammaproteobacteria
CCC
Gly
>WENV11101759
AGFS01123776
78563
Gammaproteobacteria
TAA
Leu
>WENV170001687
AGFS01123776
78563
Gammaproteobacteria
TAA
Leu
>WENV11101645
AGFS01092909
330651
Gammaproteobacteria
TGT
Thr
>WENV170001573
AGFS01092909
330651
Gammaproteobacteria
TGT
Thr
>WENV11101513
AGFS01046446
176827
Gammaproteobacteria
CCG
Arg
>WENV170001441
AGFS01046446
176827
Gammaproteobacteria
CCG
Arg
>WENV11101670
AGFS01101911
281314
Gammaproteobacteria
TGT
Thr
>WENV170001598
AGFS01101911
281314
Gammaproteobacteria
TGT
Thr
>WENV11101848
AGFS01157423
500085
Gammaproteobacteria
GCA
Cys
>WENV170001776
AGFS01157423
500085
Gammaproteobacteria
GCA
Cys
>WENV11101549
AGFS01057973
176627
Gammaproteobacteria
CCG
Arg
>WENV11101691
AGFS01106592
176627
Gammaproteobacteria
CCG
Arg
>WENV170001477
AGFS01057973
176627
Gammaproteobacteria
CCG
Arg
>WENV170001619
AGFS01106592
176627
Gammaproteobacteria
CCG
Arg
>WENV11101609
AGFS01078399
480506
Gammaproteobacteria
CCC
Gly
>WENV170001537
AGFS01078399
480506
Gammaproteobacteria
CCC
Gly
>WENV11101656
AGFS01096388
63595
Gammaproteobacteria
TGA
Ser
>WENV170001584
AGFS01096388
63595
Gammaproteobacteria
TGA
Ser
>WENV11101580
AGFS01064926
188969
Gammaproteobacteria
TCT
Arg
>WENV11101872
AGFS01164621
399345
Gammaproteobacteria
TCC
Gly
>WENV170001800
AGFS01164621
399345
Gammaproteobacteria
TCC
Gly
>WENV11101747
AGFS01121235
281458
Gammaproteobacteria
TGT
Thr
>WENV170001675
AGFS01121235
281458
Gammaproteobacteria
TGT
Thr
>WENV11101514
AGFS01046487
281544
Gammaproteobacteria
GAA
Phe
>WENV11101706
AGFS01111724
281544
Gammaproteobacteria
GAA
Phe
>WENV170001442
AGFS01046487
281544
Gammaproteobacteria
GAA
Phe
>WENV170001634
AGFS01111724
281544
Gammaproteobacteria
GAA
Phe
>WENV11101615
AGFS01080865
400950
Gammaproteobacteria
CCT
Arg
>WENV11101832
AGFS01146878
400950
Gammaproteobacteria
CCT
Arg
>WENV170001543
AGFS01080865
400950
Gammaproteobacteria
CCT
Arg
>WENV170001760
AGFS01146878
400950
Gammaproteobacteria
CCT
Arg
>WENV11101825
AGFS01142849
194687
Gammaproteobacteria
GTC
Asp
>WENV170001753
AGFS01142849
194687
Gammaproteobacteria
GTC
Asp
>WENV11101769
AGFS01129246
20472
Gammaproteobacteria
GCT
Ser
>WENV170001697
AGFS01129246
20472
Gammaproteobacteria
GCT
Ser
>WENV11101830
AGFS01145430
349241
Gammaproteobacteria
TTT
Lys
>WENV11101429
AGFS01015072
480368
Gammaproteobacteria
CCC
Gly
>WENV170001357
AGFS01015072
480368
Gammaproteobacteria
CCC
Gly
>WENV11101805
AGFS01136275
38349
Gammaproteobacteria
TGA
Ser
>WENV170001733
AGFS01136275
38349
Gammaproteobacteria
TGA
Ser
>WENV11101452
AGFS01024214
180975
Gammaproteobacteria
CAT
Met
>WENV11101862
AGFS01162904
180975
Gammaproteobacteria
CAT
Met
>WENV170001380
AGFS01024214
180975
Gammaproteobacteria
CAT
Met
>WENV170001790
AGFS01162904
180975
Gammaproteobacteria
CAT
Met
>WENV11101474
AGFS01030486
328876
Gammaproteobacteria
CTT
Lys
>WENV170001402
AGFS01030486
328876
Gammaproteobacteria
CTT
Lys
>WENV11101847
AGFS01156642
238305
Gammaproteobacteria
TCT
Arg
>WENV170001775
AGFS01156642
238305
Gammaproteobacteria
TCT
Arg
>WENV11101553
AGFS01060686
117788
Gammaproteobacteria
TAG
Leu
>WENV170001481
AGFS01060686
117788
Gammaproteobacteria
TAG
Leu
>WENV11101425
AGFS01013296
481247
Gammaproteobacteria
CTG
Gln
>WENV170001353
AGFS01013296
481247
Gammaproteobacteria
CTG
Gln
>WENV11101802
AGFS01135800
179074
Gammaproteobacteria
CCT
Arg
>WENV170001730
AGFS01135800
179074
Gammaproteobacteria
CCT
Arg
>WENV11101746
AGFS01121235
398951
Gammaproteobacteria
>WENV170001674
AGFS01121235
398951
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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