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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170003517
AGTN01366485
480576
Bacillota
GCA
Cys
>WENV170004252
AGTN01618419
229015
Bacillota
GTG
His
>WENV170003955
AGTN01514099
399246
Bacillota
GCC
Gly
>WENV170002854
AGTN01148194
314780
Bacillota
TGT
Thr
>WENV170003419
AGTN01329456
296941
Bacillota
TGC
Ala
>WENV170004069
AGTN01550881
296941
Bacillota
TGC
Ala
>WENV170003555
AGTN01373148
291553
Bacillota
GAA
Phe
>WENV170004010
AGTN01534372
229487
Bacillota
GTC
Asp
>WENV170002825
AGTN01140020
229487
Bacillota
GTC
Asp
>WENV170002512
AGTN01055409
284506
Bacillota
CCA
Trp
>WENV170003014
AGTN01195724
176341
Bacillota
ACG
Arg
>WENV170002342
AGTN01000073
399152
Bacillota
GCC
Gly
>WENV170003518
AGTN01366834
399152
Bacillota
GCC
Gly
>WENV170002434
AGTN01028558
290325
Bacillota
GCC
Gly
>WENV170002593
AGTN01077986
192086
Bacillota
TGG
Pro
>WENV170004632
AGTN01742122
400508
Bacillota
>WENV170002941
AGTN01174659
289282
Bacillota
TGG
Pro
>WENV170003000
AGTN01188974
176391
Bacillota
TGG
Pro
>WENV170004636
AGTN01743355
176391
Bacillota
TGG
Pro
>WENV170003340
AGTN01304609
482449
Bacillota
TCC
Gly
>WENV170003671
AGTN01413392
178612
Bacillota
CCT
Arg
>WENV170002802
AGTN01134555
283213
Bacillota
TGT
Thr
>WENV170003362
AGTN01312818
46655
Bacillota
TGA
Ser
>WENV170003498
AGTN01357869
398857
Bacillota
TTC
Glu
>WENV170004631
AGTN01742122
354380
Bacillota
TTT
Lys
>WENV170004629
AGTN01742087
342104
Bacillota
TAC
Val
>WENV170002709
AGTN01110582
25955
Bacillota
GCT
Ser
>WENV170003899
AGTN01495352
281626
Bacillota
TTT
Lys
>WENV170003942
AGTN01509341
158635
Bacillota
GGG
Pro
>WENV170002619
AGTN01085420
301494
Bacillota
TTT
Lys
>WENV170003519
AGTN01366834
400371
Bacillota
GCA
Cys
>WENV170003881
AGTN01487218
281271
Bacillota
TGC
Ala
>WENV170002933
AGTN01172452
280483
Bacillota
GAA
Phe
>WENV170002898
AGTN01163862
298260
Bacillota
GTT
Asn
>WENV170003740
AGTN01433910
285756
Bacillota
GCC
Gly
>WENV170004595
AGTN01733793
443965
Bacillota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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