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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005979
AMQJ01008898
235988
Bacteroidota
TGC
Ala
>WENV170005951
AMQJ01006528
170858
Bacteroidota
TGG
Pro
>WENV170006016
AMQJ01014671
179597
Bacteroidota
GTG
His
>WENV170006017
AMQJ01014913
282369
Bacteroidota
TTT
Lys
>WENV170006047
AMQJ01017609
165648
Bacteroidota
TAC
Val
>WENV170006037
AMQJ01016852
179689
Bacteroidota
GTC
Asp
>WENV170005996
AMQJ01010912
177083
Bacteroidota
TGT
Thr
>WENV170006008
AMQJ01014168
227539
Bacteroidota
GTT
Asn
>WENV170006006
AMQJ01013144
284409
Bacteroidota
CAT
Met
>WENV170005956
AMQJ01006697
282131
Bacteroidota
TTG
Gln
>WENV170005998
AMQJ01011062
408604
Bacteroidota
GGT
Thr
>WENV170006087
AMQJ01025714
399343
Bacteroidota
TTC
Glu
>WENV170006014
AMQJ01014576
399343
Bacteroidota
TTC
Glu
>WENV170005977
AMQJ01008846
399343
Bacteroidota
TTC
Glu
>WENV170006000
AMQJ01011687
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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