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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015436
AZIG01006974
180052
Gammaproteobacteria
CCT
Arg
>WENV170015359
AZIG01004225
330651
Gammaproteobacteria
TGT
Thr
>WENV170015437
AZIG01006974
180053
Gammaproteobacteria
CAT
Met
>WENV170015416
AZIG01006305
73863
Gammaproteobacteria
CAG
Leu
>WENV170015406
AZIG01006122
140925
Gammaproteobacteria
GTA
Tyr
>WENV170015468
AZIG01007374
176627
Gammaproteobacteria
CCG
Arg
>WENV170015343
AZIG01003421
371413
Gammaproteobacteria
TGT
Thr
>WENV170015483
AZIG01008367
63595
Gammaproteobacteria
TGA
Ser
>WENV170015478
AZIG01007419
480516
Gammaproteobacteria
GCA
Cys
>WENV170015399
AZIG01005693
176242
Gammaproteobacteria
CCG
Arg
>WENV170015417
AZIG01006305
280812
Gammaproteobacteria
GAA
Phe
>WENV170015411
AZIG01006167
118413
Gammaproteobacteria
TAG
Leu
>WENV170015477
AZIG01007419
306288
Gammaproteobacteria
GCC
Gly
>WENV170015447
AZIG01007111
118322
Gammaproteobacteria
TAA
Leu
>WENV170015333
AZIG01003155
205770
Gammaproteobacteria
ACG
Arg
>WENV170015334
AZIG01003155
205770
Gammaproteobacteria
ACG
Arg
>WENV170015331
AZIG01003155
20472
Gammaproteobacteria
GCT
Ser
>WENV170015461
AZIG01007320
29777
Gammaproteobacteria
GGA
Ser
>WENV170015452
AZIG01007119
56623
Gammaproteobacteria
GGA
Ser
>WENV170015467
AZIG01007373
117930
Gammaproteobacteria
CAA
Leu
>WENV170015346
AZIG01003734
481314
Gammaproteobacteria
GCA
Cys
>WENV170015398
AZIG01005687
315775
Gammaproteobacteria
TGT
Thr
>WENV170015335
AZIG01003155
179074
Gammaproteobacteria
CCT
Arg
>WENV170015375
AZIG01004561
186591
Gammaproteobacteria
ACG
Arg
>WENV170015363
AZIG01004287
186591
Gammaproteobacteria
ACG
Arg
>WENV170015394
AZIG01005638
118321
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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