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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015852
AZIJ01001535
400818
Bacteroidota
TTC
Glu
>WENV170015901
AZIJ01003423
156605
Bacteroidota
GAC
Val
>WENV170016176
AZIJ01014507
156605
Bacteroidota
GAC
Val
>WENV170015838
AZIJ01000803
156756
Bacteroidota
TGG
Pro
>WENV170016012
AZIJ01007816
303411
Bacteroidota
>WENV170016163
AZIJ01013754
282369
Bacteroidota
TTT
Lys
>WENV170015979
AZIJ01006057
216338
Bacteroidota
GTG
His
>WENV170016082
AZIJ01012125
155808
Bacteroidota
TGG
Pro
>WENV170016083
AZIJ01012125
176707
Bacteroidota
TCT
Arg
>WENV170016201
AZIJ01016097
291910
Bacteroidota
TTG
Gln
>WENV170016008
AZIJ01007505
177083
Bacteroidota
TGT
Thr
>WENV170016076
AZIJ01011985
227539
Bacteroidota
GTT
Asn
>WENV170015826
AZIJ01000391
183856
Bacteroidota
CAT
Met
>WENV170015839
AZIJ01000803
231584
Bacteroidota
TCT
Arg
>WENV170016300
AZIJ01022391
231598
Bacteroidota
GGC
Ala
>WENV170016047
AZIJ01009984
365090
Bacteroidota
TTT
Lys
>WENV170016188
AZIJ01015232
372845
Bacteroidota
CCA
Trp
>WENV170016080
AZIJ01012112
372845
Bacteroidota
CCA
Trp
>WENV170015917
AZIJ01004192
118418
Bacteroidota
TAG
Leu
>WENV170015936
AZIJ01004690
296664
Bacteroidota
GAA
Phe
>WENV170016079
AZIJ01012112
408604
Bacteroidota
GGT
Thr
>WENV170015902
AZIJ01003498
399343
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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