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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085272
BABC01000097
481233
Actinomycetota
CCC
Gly
>WENV085310
BABC01000302
176499
Actinomycetota
CAT
Met
>WENV085288
BABC01000173
147829
Actinomycetota
TAA
Leu
>WENV085274
BABC01000111
280498
Actinomycetota
GTT
Asn
>WENV085350
BABC01000552
280498
Actinomycetota
GTT
Asn
>WENV085353
BABC01000770
280498
Actinomycetota
GTT
Asn
>WENV085354
BABC01000770
280498
Actinomycetota
GTT
Asn
>WENV085440
BABC01008314
184065
Actinomycetota
TGG
Pro
>WENV085281
BABC01000140
295964
Actinomycetota
GTT
Asn
>WENV085331
BABC01000391
459899
Actinomycetota
TTC
Glu
>WENV085261
BABC01000036
140768
Actinomycetota
TAG
Leu
>WENV085287
BABC01000166
140768
Actinomycetota
TAG
Leu
>WENV085308
BABC01000300
140768
Actinomycetota
TAG
Leu
>WENV085340
BABC01000407
140768
Actinomycetota
TAG
Leu
>WENV085359
BABC01000948
140768
Actinomycetota
TAG
Leu
>WENV085282
BABC01000157
176075
Actinomycetota
TCT
Arg
>WENV085443
BABC01008702
175848
Actinomycetota
TGG
Pro
>WENV085237
BABC01000007
175848
Actinomycetota
TGG
Pro
>WENV085266
BABC01000063
176078
Actinomycetota
GGG
Pro
>WENV085250
BABC01000017
152047
Actinomycetota
ACG
Arg
>WENV085235
BABC01000002
59689
Actinomycetota
GGA
Ser
>WENV085267
BABC01000064
175837
Actinomycetota
ACG
Arg
>WENV085268
BABC01000064
175837
Actinomycetota
ACG
Arg
>WENV085304
BABC01000267
175837
Actinomycetota
ACG
Arg
>WENV085305
BABC01000267
175837
Actinomycetota
ACG
Arg
>WENV085375
BABC01001270
46681
Actinomycetota
CGA
Ser
>WENV085283
BABC01000164
29393
Actinomycetota
GCT
Ser
>WENV085275
BABC01000113
280549
Actinomycetota
CAC
Val
>WENV085296
BABC01000229
280549
Actinomycetota
CAC
Val
>WENV085404
BABC01004397
280549
Actinomycetota
CAC
Val
>WENV085445
BABC01009101
349164
Actinomycetota
CTC
Glu
>WENV085233
BABC01000002
349164
Actinomycetota
CTC
Glu
>WENV085280
BABC01000125
20450
Actinomycetota
GAG
Leu
>WENV085293
BABC01000223
280702
Actinomycetota
GGC
Ala
>WENV085294
BABC01000223
280702
Actinomycetota
GGC
Ala
>WENV085429
BABC01007841
280702
Actinomycetota
GGC
Ala
>WENV085430
BABC01007841
280702
Actinomycetota
GGC
Ala
>WENV085256
BABC01000024
176077
Actinomycetota
CAT
Met
>WENV085347
BABC01000538
176638
Actinomycetota
GGG
Pro
>WENV085423
BABC01006220
176638
Actinomycetota
GGG
Pro
>WENV085257
BABC01000029
280524
Actinomycetota
TGC
Ala
>WENV085431
BABC01007910
398948
Actinomycetota
TTC
Glu
>WENV085278
BABC01000116
398948
Actinomycetota
TTC
Glu
>WENV085301
BABC01000253
281239
Actinomycetota
TTT
Lys
>WENV085285
BABC01000164
117777
Actinomycetota
>WENV085338
BABC01000406
280523
Actinomycetota
GGC
Ala
>WENV085315
BABC01000356
280523
Actinomycetota
GGC
Ala
>WENV085284
BABC01000164
175949
Actinomycetota
CAT
Met
>WENV085264
BABC01000054
227544
Actinomycetota
TAC
Val
>WENV085240
BABC01000016
227544
Actinomycetota
TAC
Val
>WENV085269
BABC01000075
191955
Actinomycetota
TGT
Thr
>WENV085291
BABC01000193
280544
Actinomycetota
GTG
His
>WENV085361
BABC01001130
179229
Actinomycetota
GTC
Asp
>WENV085362
BABC01001130
179229
Actinomycetota
GTC
Asp
>WENV085400
BABC01003032
280496
Actinomycetota
CGT
Thr
>WENV085273
BABC01000103
280703
Actinomycetota
CCT
Arg
>WENV085381
BABC01001614
56153
Actinomycetota
GGA
Ser
>WENV085442
BABC01008354
56153
Actinomycetota
GGA
Ser
>WENV085314
BABC01000353
20205
Actinomycetota
GCT
Ser
>WENV085265
BABC01000059
280450
Actinomycetota
TTT
Lys
>WENV085276
BABC01000113
468141
Actinomycetota
GAC
Val
>WENV085297
BABC01000229
468141
Actinomycetota
GAC
Val
>WENV085358
BABC01000948
323758
Actinomycetota
CGT
Thr
>WENV085286
BABC01000166
323758
Actinomycetota
CGT
Thr
>WENV085260
BABC01000036
323758
Actinomycetota
CGT
Thr
>WENV085346
BABC01000476
358727
Actinomycetota
CCG
Arg
>WENV085271
BABC01000096
358727
Actinomycetota
CCG
Arg
>WENV085426
BABC01007224
480329
Actinomycetota
CCC
Gly
>WENV085425
BABC01007122
480329
Actinomycetota
CCC
Gly
>WENV085408
BABC01005263
480329
Actinomycetota
CCC
Gly
>WENV085393
BABC01002101
480329
Actinomycetota
CCC
Gly
>WENV085290
BABC01000182
56451
Actinomycetota
CGA
Ser
>WENV085313
BABC01000334
175882
Actinomycetota
TGG
Pro
>WENV085270
BABC01000077
99865
Actinomycetota
CAG
Leu
>WENV085255
BABC01000018
222475
Actinomycetota
CTT
Lys
>WENV085335
BABC01000401
480319
Actinomycetota
TTG
Gln
>WENV085396
BABC01002554
480319
Actinomycetota
TTG
Gln
>WENV085302
BABC01000260
280489
Actinomycetota
CTC
Glu
>WENV085446
BABC01009101
398853
Actinomycetota
CTG
Gln
>WENV085303
BABC01000260
398853
Actinomycetota
CTG
Gln
>WENV085238
BABC01000007
175843
Actinomycetota
CAA
Leu
>WENV085292
BABC01000209
175843
Actinomycetota
CAA
Leu
>WENV085398
BABC01002932
237585
Actinomycetota
TAC
Val
>WENV085344
BABC01000437
104211
Actinomycetota
CAG
Leu
>WENV085234
BABC01000002
430848
Actinomycetota
CTG
Gln
>WENV085309
BABC01000302
117903
Actinomycetota
GTA
Tyr
>WENV085258
BABC01000029
179238
Actinomycetota
GAT
Ile
>WENV085239
BABC01000013
60767
Actinomycetota
TGA
Ser
>WENV085236
BABC01000006
506175
Actinomycetota
TTG
Gln
>WENV085417
BABC01005728
506175
Actinomycetota
TTG
Gln
>WENV085339
BABC01000407
280470
Actinomycetota
CGT
Thr
>WENV085307
BABC01000300
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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